RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C RIB5P38145 238 aa8□□□□□ -1.13
POM34YLR018C YJL163CP46996 555 aa8□□□□□ -1.13
POM34YLR018C YAP1802P53309 568 aa8□□□□□ -1.13
POM34YLR018C YMR007WQ03675 126 aa8□□□□□ -1.13
POM34YLR018C SDO1Q07953 250 aaKnown RBP8□□□□□ -1.13
POM34YLR018C QCR9P22289 66 aa7.99□□□□□ -1.13
POM34YLR018C TOM40P23644 387 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C LDS1P31379 325 aa7.99□□□□□ -1.13
POM34YLR018C RPL14AP36105 138 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C QDR3P38227 689 aa7.99□□□□□ -1.13
POM34YLR018C RPL14BP38754 138 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C BOR1P53838 576 aa7.99□□□□□ -1.13
POM34YLR018C SHH3Q04487 196 aa7.99□□□□□ -1.13
POM34YLR018C AVO2Q04749 426 aa7.99□□□□□ -1.13
POM34YLR018C SME1Q12330 94 aaPredicted RBP7.99□□□□□ -1.13
POM34YLR018C PAA1Q12447 191 aaKnown RBP7.99□□□□□ -1.13
POM34YLR018C YMR316C-AI2HB70 103 aa7.98□□□□□ -1.13
POM34YLR018C SUA7P29055 345 aaPredicted RBP7.98□□□□□ -1.13
POM34YLR018C PTC7P38797 343 aa7.98□□□□□ -1.13
POM34YLR018C MIC27P50945 234 aa7.98□□□□□ -1.13
POM34YLR018C YPL108WQ02872 168 aaPredicted RBP7.98□□□□□ -1.13
POM34YLR018C SRL1Q08673 210 aa7.98□□□□□ -1.13
POM34YLR018C RAD28Q12021 506 aa7.98□□□□□ -1.13
POM34YLR018C RKI1Q12189 258 aa7.98□□□□□ -1.13
POM34YLR018C ILV5P06168 395 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C FPR2P32472 135 aa7.97□□□□□ -1.13
POM34YLR018C MRPL38P35996 138 aaPredicted RBP7.97□□□□□ -1.13
POM34YLR018C SHB17P36136 271 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C DER1P38307 211 aa7.97□□□□□ -1.13
POM34YLR018C SMD3P43321 101 aaKnown RBP7.97□□□□□ -1.13
POM34YLR018C Q0142Q9ZZW4 58 aa7.97□□□□□ -1.13
POM34YLR018C PIS1P06197 220 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C FEN2P25621 512 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C YBL071CP38185 102 aa7.96□□□□□ -1.14
POM34YLR018C YER188WP40103 239 aa7.96□□□□□ -1.14
POM34YLR018C GPP2P40106 250 aaKnown RBP7.96□□□□□ -1.14
POM34YLR018C RTS2P40962 232 aa7.96□□□□□ -1.14
POM34YLR018C RIB4P50861 169 aaPredicted RBP7.96□□□□□ -1.14
POM34YLR018C LST7P53237 242 aa7.96□□□□□ -1.14
POM34YLR018C CAF40P53829 373 aa7.96□□□□□ -1.14
POM34YLR018C IRC23Q08416 157 aa7.96□□□□□ -1.14
POM34YLR018C TY1A-DR4O74302 440 aa7.95□□□□□ -1.14
POM34YLR018C RPL15AP05748 204 aaKnown RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-AP0CX57 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-PR1P0CX58 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ORP0CX59 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-PR2P0CX60 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-DR5P0CX65 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ER2P0CX66 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-GR3P0CX67 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-LR1P0CX68 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-MR2P0CX69 440 aa7.95□□□□□ -1.14
POM34YLR018C YPS1P32329 569 aa7.95□□□□□ -1.14
POM34YLR018C DAL3P32459 195 aa7.95□□□□□ -1.14
POM34YLR018C YAR068WP39564 161 aa7.95□□□□□ -1.14
POM34YLR018C BDH1P39714 382 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-JR2P47099 440 aa7.95□□□□□ -1.14
POM34YLR018C PAU4P53427 120 aa7.95□□□□□ -1.14
POM34YLR018C RPL15BP54780 204 aaPredicted RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-DR1Q03856 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-ML1Q04706 440 aaKnown RBP7.95□□□□□ -1.14
POM34YLR018C TY1A-BRQ12217 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-NL2Q12470 440 aa7.95□□□□□ -1.14
POM34YLR018C TY1A-GR2Q12485 440 aa7.95□□□□□ -1.14
POM34YLR018C CCW14O13547 238 aa7.94□□□□□ -1.14
POM34YLR018C DFR1P07807 211 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
POM34YLR018C MRP2P10663 115 aaPredicted RBP7.94□□□□□ -1.14
POM34YLR018C CSH1P38287 376 aa7.94□□□□□ -1.14
POM34YLR018C TIF11P38912 153 aaKnown RBP7.94□□□□□ -1.14
POM34YLR018C TAX4P47030 604 aa7.94□□□□□ -1.14
POM34YLR018C YGR018CP53211 109 aa7.94□□□□□ -1.14
POM34YLR018C PBP4Q07362 185 aaKnown RBP7.94□□□□□ -1.14
POM34YLR018C RXT3Q07458 294 aa7.94□□□□□ -1.14
POM34YLR018C PCC1Q3E833 88 aa7.94□□□□□ -1.14
POM34YLR018C YCR022CP25620 114 aa7.93□□□□□ -1.14
POM34YLR018C ALK2P32789 676 aaPredicted RBP7.93□□□□□ -1.14
POM34YLR018C YIL024CP40543 189 aa7.93□□□□□ -1.14
POM34YLR018C AVT5P38176 459 aa7.92□□□□□ -1.14
POM34YLR018C CDS1P38221 457 aa7.92□□□□□ -1.14
POM34YLR018C DOG2P38773 246 aa7.92□□□□□ -1.14
POM34YLR018C DOG1P38774 246 aa7.92□□□□□ -1.14
POM34YLR018C SNO1Q03144 224 aa7.92□□□□□ -1.14
POM34YLR018C ATC1Q04005 294 aa7.92□□□□□ -1.14
POM34YLR018C YMR253CQ04835 414 aa7.92□□□□□ -1.14
POM34YLR018C YOR352WQ08816 343 aa7.92□□□□□ -1.14
POM34YLR018C YOR097CQ12274 175 aaPredicted RBP7.92□□□□□ -1.14
POM34YLR018C PAU1P0CE88 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU14P0CE89 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU6P0CE90 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU18P0CE91 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU8P0CE92 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU11P0CE93 120 aa7.91□□□□□ -1.14
POM34YLR018C CNB1P25296 175 aa7.91□□□□□ -1.14
POM34YLR018C PRS4P38063 326 aaPredicted RBP7.91□□□□□ -1.14
POM34YLR018C RRT1P38192 103 aa7.91□□□□□ -1.14
POM34YLR018C PAU13P38725 120 aa7.91□□□□□ -1.14
POM34YLR018C ATG27P46989 271 aa7.91□□□□□ -1.14
POM34YLR018C DSK2P48510 373 aa7.91□□□□□ -1.14
POM34YLR018C PAU10Q03050 120 aa7.91□□□□□ -1.14
POM34YLR018C PAU20Q08322 120 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms