RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W CWC27Q02770 301 aa3.62□□□□□ -1.83
PRE9YGR135W PET191Q02772 108 aa3.62□□□□□ -1.83
PRE9YGR135W YPL080CQ02826 108 aa3.62□□□□□ -1.83
PRE9YGR135W PAU10Q03050 120 aa3.62□□□□□ -1.83
PRE9YGR135W SHH3Q04487 196 aa3.62□□□□□ -1.83
PRE9YGR135W FRQ1Q06389 190 aa3.62□□□□□ -1.83
PRE9YGR135W GAT3Q07928 141 aa3.62□□□□□ -1.83
PRE9YGR135W COQ10Q08058 207 aa3.62□□□□□ -1.83
PRE9YGR135W PAU20Q08322 120 aa3.62□□□□□ -1.83
PRE9YGR135W YOR029WQ12243 111 aa3.62□□□□□ -1.83
PRE9YGR135W ERV2Q12284 196 aa3.62□□□□□ -1.83
PRE9YGR135W PRR2Q12310 699 aa3.62□□□□□ -1.83
PRE9YGR135W SME1Q12330 94 aaPredicted RBP3.62□□□□□ -1.83
PRE9YGR135W PAU9Q3E770 120 aa3.62□□□□□ -1.83
PRE9YGR135W YDR157WA0A023PZE8 133 aa3.61□□□□□ -1.83
PRE9YGR135W HTB1P02293 131 aaKnown RBP3.61□□□□□ -1.83
PRE9YGR135W HTB2P02294 131 aa3.61□□□□□ -1.83
PRE9YGR135W RFA3P26755 122 aaKnown RBP3.61□□□□□ -1.83
PRE9YGR135W AHT1P29589 182 aa3.61□□□□□ -1.83
PRE9YGR135W ZRT1P32804 376 aa3.61□□□□□ -1.83
PRE9YGR135W ABM1P47146 123 aa3.61□□□□□ -1.83
PRE9YGR135W ERG25P53045 309 aa3.61□□□□□ -1.83
PRE9YGR135W RNH201P53942 307 aa3.61□□□□□ -1.83
PRE9YGR135W RCE1Q03530 315 aa3.61□□□□□ -1.83
PRE9YGR135W PKR1Q03880 122 aaKnown RBP3.61□□□□□ -1.83
PRE9YGR135W RUB1Q03919 77 aa3.61□□□□□ -1.83
PRE9YGR135W TVP18Q04767 167 aa3.61□□□□□ -1.83
PRE9YGR135W NAT5Q08689 176 aa3.61□□□□□ -1.83
PRE9YGR135W FCY22Q12119 530 aa3.61□□□□□ -1.83
PRE9YGR135W MDM35O60200 86 aa3.6□□□□□ -1.83
PRE9YGR135W HAP3P13434 144 aa3.6□□□□□ -1.83
PRE9YGR135W DAL82P21705 255 aa3.6□□□□□ -1.83
PRE9YGR135W MDH2P22133 377 aa3.6□□□□□ -1.83
PRE9YGR135W MIG1P27705 504 aa3.6□□□□□ -1.83
PRE9YGR135W PPA2P28239 310 aa3.6□□□□□ -1.83
PRE9YGR135W ERG2P32352 222 aa3.6□□□□□ -1.83
PRE9YGR135W FIG1P38224 298 aa3.6□□□□□ -1.83
PRE9YGR135W CUE1P38428 203 aa3.6□□□□□ -1.83
PRE9YGR135W YER188WP40103 239 aa3.6□□□□□ -1.83
PRE9YGR135W YNL208WP40159 199 aaKnown RBP3.6□□□□□ -1.83
PRE9YGR135W YIL169CP40442 995 aa3.6□□□□□ -1.83
PRE9YGR135W MSO1P53604 210 aaKnown RBP3.6□□□□□ -1.83
PRE9YGR135W RHO3Q00245 231 aaKnown RBP3.6□□□□□ -1.83
PRE9YGR135W YPL067CQ02754 198 aa3.6□□□□□ -1.83
PRE9YGR135W PAM18Q07914 168 aa3.6□□□□□ -1.83
PRE9YGR135W YLR030WQ07967 263 aa3.6□□□□□ -1.83
PRE9YGR135W ADH2P00331 348 aaKnown RBP3.59□□□□□ -1.83
PRE9YGR135W COX2P00410 251 aa3.59□□□□□ -1.83
PRE9YGR135W POR1P04840 283 aaKnown RBP3.59□□□□□ -1.83
PRE9YGR135W PRE1P22141 198 aaKnown RBP3.59□□□□□ -1.83
PRE9YGR135W SPO13P23624 291 aa3.59□□□□□ -1.83
PRE9YGR135W RNA15P25299 296 aaPredicted RBP3.59□□□□□ -1.83
PRE9YGR135W YCR022CP25620 114 aa3.59□□□□□ -1.83
PRE9YGR135W TCA17P32613 152 aa3.59□□□□□ -1.83
PRE9YGR135W YKL102CP34249 101 aa3.59□□□□□ -1.83
PRE9YGR135W YKL075CP36083 450 aa3.59□□□□□ -1.83
PRE9YGR135W FRM2P37261 193 aa3.59□□□□□ -1.83
PRE9YGR135W MTC6P38849 526 aa3.59□□□□□ -1.83
PRE9YGR135W HIT1P46973 164 aa3.59□□□□□ -1.83
PRE9YGR135W BRR6P53062 197 aa3.59□□□□□ -1.83
PRE9YGR135W NCE101Q02820 53 aa3.59□□□□□ -1.83
PRE9YGR135W YMR254CQ04838 102 aa3.59□□□□□ -1.83
PRE9YGR135W ADH6Q04894 360 aaKnown RBP3.59□□□□□ -1.83
PRE9YGR135W PAU23Q07987 124 aa3.59□□□□□ -1.83
PRE9YGR135W CSI2Q08054 341 aa3.59□□□□□ -1.83
PRE9YGR135W MCP1Q12106 302 aa3.59□□□□□ -1.83
PRE9YGR135W PAU17Q12370 124 aa3.59□□□□□ -1.83
PRE9YGR135W YOR343CQ12484 108 aa3.59□□□□□ -1.83
PRE9YGR135W YLR422WQ06409 1932 aa3.59□□□□□ -1.83
PRE9YGR135W COX5BP00425 151 aa3.58□□□□□ -1.84
PRE9YGR135W FMP46P36141 133 aaKnown RBP3.58□□□□□ -1.84
PRE9YGR135W AIM29P36154 155 aa3.58□□□□□ -1.84
PRE9YGR135W POP7P38291 140 aa3.58□□□□□ -1.84
PRE9YGR135W DFG10P40526 253 aa3.58□□□□□ -1.84
PRE9YGR135W YFR054CP43622 192 aa3.58□□□□□ -1.84
PRE9YGR135W YAR1P46683 200 aa3.58□□□□□ -1.84
PRE9YGR135W TTI2P47168 421 aa3.58□□□□□ -1.84
PRE9YGR135W YDR366CP87287 132 aa3.58□□□□□ -1.84
PRE9YGR135W APS2Q00381 147 aa3.58□□□□□ -1.84
PRE9YGR135W YMR181CQ03231 154 aa3.58□□□□□ -1.84
PRE9YGR135W YMR090WQ04304 227 aaKnown RBP3.58□□□□□ -1.84
PRE9YGR135W FMP49A0A023PZB3 126 aa3.57□□□□□ -1.84
PRE9YGR135W YPR170W-BP0C5R9 85 aa3.57□□□□□ -1.84
PRE9YGR135W URA5P13298 226 aaKnown RBP3.57□□□□□ -1.84
PRE9YGR135W UTR5P32630 166 aa3.57□□□□□ -1.84
PRE9YGR135W YKL187CP34231 750 aa3.57□□□□□ -1.84
PRE9YGR135W PAU16P35994 123 aa3.57□□□□□ -1.84
PRE9YGR135W MIX23P38162 196 aa3.57□□□□□ -1.84
PRE9YGR135W COX14P39103 70 aa3.57□□□□□ -1.84
PRE9YGR135W YIA6P40556 373 aa3.57□□□□□ -1.84
PRE9YGR135W OST1P41543 476 aaKnown RBP3.57□□□□□ -1.84
PRE9YGR135W YCH1P42937 148 aa3.57□□□□□ -1.84
PRE9YGR135W HHT1P61830 136 aa3.57□□□□□ -1.84
PRE9YGR135W DAD3P69850 94 aa3.57□□□□□ -1.84
PRE9YGR135W YLR179CQ06252 201 aaKnown RBP3.57□□□□□ -1.84
PRE9YGR135W MCH1Q07376 486 aa3.57□□□□□ -1.84
PRE9YGR135W MIM1Q08176 113 aa3.57□□□□□ -1.84
PRE9YGR135W YPL264CQ08980 353 aa3.57□□□□□ -1.84
PRE9YGR135W YLR365WQ7LIF2 110 aa3.57□□□□□ -1.84
PRE9YGR135W MSW1P04803 379 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms