RNA–Protein interactions for RNA: YGR040W

KSS1, Transcript of Mitogen-activated protein kinase (MAPK), yeast

Gene KSS1, Length 1,107 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KSS1	YGR040W	YPL278C	Q08990	100 aa		4.85	□□□□□ -1.63
KSS1	YGR040W	PRR2	Q12310	699 aa		4.85	□□□□□ -1.63
KSS1	YGR040W	ADH3	P07246	375 aa	Known RBP	4.84	□□□□□ -1.63
KSS1	YGR040W	MAK32	P23060	363 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	LSB5	P25369	354 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	ATG8	P38182	117 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
KSS1	YGR040W	YHR138C	P38841	114 aa	Predicted RBP	4.84	□□□□□ -1.63
KSS1	YGR040W	FLO5	P38894	1075 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	SEN34	P39707	275 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	RMD6	P39975	231 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	GTT1	P40582	234 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	SMD3	P43321	101 aa	Known RBP	4.84	□□□□□ -1.63
KSS1	YGR040W	GON7	P46984	123 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	XPT1	P47165	209 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	GEP7	P53171	287 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	SSU72	P53538	206 aa	Predicted RBP	4.84	□□□□□ -1.63
KSS1	YGR040W	FSH2	Q05015	223 aa		4.84	□□□□□ -1.63
KSS1	YGR040W	CSF1	Q12150	2958 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	IPP1	P00817	287 aa	Known RBP	4.83	□□□□□ -1.64
KSS1	YGR040W	ILV5	P06168	395 aa	Known RBP	4.83	□□□□□ -1.64
KSS1	YGR040W	ROX3	P25046	220 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	ELO2	P25358	347 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	CPR5	P35176	225 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	TTI2	P47168	421 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	YGL114W	P53134	725 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	WSC2	P53832	503 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	SUR7	P54003	302 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	DCS1	Q06151	350 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	YDL218W	Q07629	317 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	RFM1	Q12192	310 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	RDL1	Q12305	139 aa	Known RBP	4.83	□□□□□ -1.64
KSS1	YGR040W	SME1	Q12330	94 aa	Predicted RBP	4.83	□□□□□ -1.64
KSS1	YGR040W	YPR145C-A	Q2V2P0	78 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	BOL1	Q3E793	110 aa		4.83	□□□□□ -1.64
KSS1	YGR040W	URA5	P13298	226 aa	Known RBP	4.82	□□□□□ -1.64
KSS1	YGR040W	YMR31	P19955	123 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	SPO13	P23624	291 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	CDC50	P25656	391 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	RPL14A	P36105	138 aa	Known RBP	4.82	□□□□□ -1.64
KSS1	YGR040W	YBR220C	P38318	560 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	RPL14B	P38754	138 aa	Known RBP	4.82	□□□□□ -1.64
KSS1	YGR040W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
KSS1	YGR040W	VMA21	P41806	77 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	NSE4	P43124	402 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	ARP3	P47117	449 aa	Known RBP	4.82	□□□□□ -1.64
KSS1	YGR040W	YGL262W	P53054	175 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	YGL260W	P53056	76 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	YGR026W	P53217	278 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	YGR050C	P53231	118 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	PAU4	P53427	120 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	CRZ1	P53968	678 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	DIA1	P54005	336 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	LPP1	Q04396	274 aa		4.82	□□□□□ -1.64
KSS1	YGR040W	SNU23	Q12368	194 aa	Predicted RBP	4.82	□□□□□ -1.64
KSS1	YGR040W	RPS23A	P0CX29	145 aa	Known RBP	4.81	□□□□□ -1.64
KSS1	YGR040W	RPS23B	P0CX30	145 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	SEC59	P20048	519 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	AHT1	P29589	182 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	YHL037C	P38733	133 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	RTS2	P40962	232 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	RPL21A	Q02753	160 aa	Known RBP	4.81	□□□□□ -1.64
KSS1	YGR040W	YDR114C	Q04597	100 aa		4.81	□□□□□ -1.64
KSS1	YGR040W	RPL21B	Q12672	160 aa	Known RBP	4.81	□□□□□ -1.64
KSS1	YGR040W	RPS25B	P0C0T4	108 aa	Known RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	PAU1	P0CE88	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU14	P0CE89	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU6	P0CE90	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU18	P0CE91	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU8	P0CE92	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU11	P0CE93	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	FCY2	P17064	533 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	QCR9	P22289	66 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	NTF2	P33331	125 aa	Known RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	CMC1	P36064	111 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	TRS20	P38334	175 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	CUE1	P38428	203 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU13	P38725	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	SEC72	P39742	193 aa	Known RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	COX15	P40086	486 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PHS1	P40857	217 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	YFL051C	P43552	160 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	DAN1	P47178	298 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	RIB4	P50861	169 aa	Predicted RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	HCH1	P53834	153 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU10	Q03050	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	API2	Q04413	109 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	DXO1	Q06349	442 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	GAT3	Q07928	141 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU20	Q08322	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	YGL258W-A	Q3E740	77 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	PAU9	Q3E770	120 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	LSO2	Q3E772	92 aa	Known RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	RPS25A	Q3E792	108 aa	Predicted RBP	4.8	□□□□□ -1.64
KSS1	YGR040W	YOS1	Q3E834	85 aa		4.8	□□□□□ -1.64
KSS1	YGR040W	RPL9A	P05738	191 aa	Known RBP	4.79	□□□□□ -1.64
KSS1	YGR040W	CDC7	P06243	507 aa		4.79	□□□□□ -1.64
KSS1	YGR040W	RPB3	P16370	318 aa	Known RBP	4.79	□□□□□ -1.64
KSS1	YGR040W	SHB17	P36136	271 aa	Known RBP	4.79	□□□□□ -1.64
KSS1	YGR040W	SDH4	P37298	181 aa		4.79	□□□□□ -1.64
KSS1	YGR040W	MRPS9	P38120	278 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms