RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-280	ENST00000642102		E9PLN8	166 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102		F5H697	171 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	SOAT2	O75908	522 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	RPLP2	P05387	115 aa	Known RBP	4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.25	□□□□□ -1.73	2e-6	■■□□□ 13.6
CASC19-280	ENST00000642102	NR2F6	P10588	404 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	KEL	P23276	732 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	TUBA4A	P68366	448 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	SLC44A4	Q53GD3	710 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	ATG9B	Q674R7	924 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	ZNF626	Q68DY1	528 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	ATL2	Q8NHH9	583 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	JADE3	Q92613	823 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	RPL36AL	Q969Q0	106 aa	Known RBP	4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	ZBTB9	Q96C00	473 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	CLPTM1L	Q96KA5	538 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	VKORC1	Q9BQB6	163 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	TPSD1	Q9BZJ3	242 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	MAN1C1	Q9NR34	630 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	SERTAD4	Q9NUC0	356 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	RLIM	Q9NVW2	624 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	SIDT1	Q9NXL6	827 aa	Known RBP	4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	SERGEF	Q9UGK8	458 aa		4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	TMA7	Q9Y2S6	64 aa	Known RBP	4.25	□□□□□ -1.73
CASC19-280	ENST00000642102	POLRMT	O00411	1230 aa	Known RBP	4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	HTRA2	O43464	458 aa	Predicted RBP	4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	RHO	P08100	348 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	ZFX	P17010	805 aa	Predicted RBP	4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	C5AR1	P21730	350 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	LPO	P22079	712 aa	Predicted RBP	4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	CERS1	P27544	350 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	NDUFV1	P49821	464 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	BMPR2	Q13873	1038 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	INAVA	Q3KP66	663 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	SDE2	Q6IQ49	451 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	PGM2L1	Q6PCE3	622 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	FKBP10	Q96AY3	582 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	FCRL4	Q96PJ5	515 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	DMRTA2	Q96SC8	542 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	AMBRA1	Q9C0C7	1298 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	PUS7L	Q9H0K6	701 aa	Known RBP	4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	TMX1	Q9H3N1	280 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	NRIP3	Q9NQ35	241 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	LIMCH1	Q9UPQ0	1083 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	BTBD3	Q9Y2F9	522 aa		4.24	□□□□□ -1.73
CASC19-280	ENST00000642102	TP73	O15350	636 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CLSTN1	O94985	981 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	NXPH3	O95157	252 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	BMP15	O95972	392 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CHEK2	O96017	543 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	EBLN1	P0CF75	366 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CYP2C19	P33261	490 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	IL10RA	Q13651	578 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	TMEM119	Q4V9L6	283 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CCDC93	Q567U6	631 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	MORN5	Q5VZ52	161 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CEP85	Q6P2H3	762 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	SLC30A10	Q6XR72	485 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	ZNF551	Q7Z340	670 aa	Predicted RBP	4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	NEK8	Q86SG6	692 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	CNTD1	Q8N815	330 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	ACTRT3	Q9BYD9	372 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	BRD9	Q9H8M2	597 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	GNL3L	Q9NVN8	582 aa	Known RBP	4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	MKS1	Q9NXB0	559 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	ETAA1	Q9NY74	926 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	PCDHB1	Q9Y5F3	818 aa		4.23	□□□□□ -1.73
CASC19-280	ENST00000642102	JTB	O76095	146 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	IGKV2-30	P06310	120 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	GNAI3	P08754	354 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	EDNRB	P24530	442 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	EPHB2	P29323	1055 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	GNAI1	P63096	354 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	ACAP2	Q15057	778 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	PROSER3	Q2NL68	480 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	C3orf36	Q3SXR2	165 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	RUSC1-AS1	Q66K80	236 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	CBARP	Q8N350	705 aa	Predicted RBP	4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	FBXO41	Q8TF61	875 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	TBC1D5	Q92609	795 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	CNPPD1	Q9BV87	410 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	BHMT2	Q9H2M3	363 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	CFAP97	Q9P2B7	532 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	PRKAB1	Q9Y478	270 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	CFAP20	Q9Y6A4	193 aa	Known RBP	4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	KAT6A	Q92794	2004 aa		4.22	□□□□□ -1.73
CASC19-280	ENST00000642102	KLHL33	A6NCF5	533 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	CCDC154	A6NI56	674 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	F2RL2	O00254	374 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	MOSPD3	O75425	235 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	FAM163B	P0C2L3	166 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	NDUFB7	P17568	137 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	ITGAL	P20701	1170 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	MAL	P21145	153 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	KLF9	Q13886	244 aa	Predicted RBP	4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	HABP2	Q14520	560 aa	Predicted RBP	4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	TBCC	Q15814	346 aa		4.21	□□□□□ -1.74
CASC19-280	ENST00000642102	RBM20	Q5T481	1227 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms