RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CEP57Q86XR8 500 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 GRK7Q8WTQ7 553 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 LRRD1A4D1F6 860 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 FAM189A1O60320 539 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 TFAMQ00059 246 aaKnown RBP17.8■□□□□ 0.44
PHGDH-223ENST00000641597 TMEM192Q8IY95 271 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 EXD1Q8NHP7 514 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 TRIM11Q96F44 468 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 SGSM3Q96HU1 749 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 PPP1R16BQ96T49 567 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-223ENST00000641597 KIAA1586Q9HCI6 787 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 MRPL47Q9HD33 250 aaKnown RBP17.8■□□□□ 0.44
PHGDH-223ENST00000641597 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 PARVAQ9NVD7 372 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 POLIQ9UNA4 740 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 SLC12A4Q9UP95 1085 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 B4GALT5O43286 388 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 PLCB3Q01970 1234 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 XRCC4Q13426 336 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 PNMA8AQ86V59 439 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 ANKMY2Q8IV38 441 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 EMC1Q8N766 993 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 ZWILCHQ9H900 591 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 NXF1Q9UBU9 619 aaKnown RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 RGS17Q9UGC6 210 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 CYTH4Q9UIA0 394 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 RASA4BC9J798 803 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 RASA4O43374 803 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.441e-16■■■■■ 39.7
PHGDH-223ENST00000641597 FARP2O94887 1054 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 ASS1P00966 412 aaKnown RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 OAS1P00973 400 aaKnown RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 GDF10P55107 478 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 CDH8P55286 799 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 WDR4P57081 412 aaKnown RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 ELF3P78545 371 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-223ENST00000641597 MGAT5Q09328 741 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 C4orf33Q8N1A6 199 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 CCDC89Q8N998 374 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 AS3MTQ9HBK9 375 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
PHGDH-223ENST00000641597 CD48P09326 243 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 TCF7P36402 384 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ZNF132P52740 706 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.443e-6■■■■□ 23.9
PHGDH-223ENST00000641597 TAF5Q15542 800 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 JOSD2Q8TAC2 188 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 TBC1D31Q96DN5 1066 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 KLRG1Q96E93 195 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 CDHR1Q96JP9 859 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 C12orf65Q9H3J6 166 aaKnown RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 GRID1Q9ULK0 1009 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 MGAMO43451 1857 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ADCY3O60266 1144 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 MSCO60682 206 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ATG7O95352 703 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ARIH2O95376 493 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 STX2P32856 288 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 RFC1P35251 1148 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ITIH4Q14624 930 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 PKN2Q16513 984 aaKnown RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 DCAF15Q66K64 600 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 DENND1BQ6P3S1 775 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 DNAJC24Q6P3W2 148 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 SPOCD1Q6ZMY3 1216 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 FITM2Q8N6M3 262 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ARFGAP1Q8N6T3 406 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 ANKLE1Q8NAG6 615 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 CNTN6Q9UQ52 1028 aa17.78■□□□□ 0.44
PHGDH-223ENST00000641597 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-223ENST00000641597 TCRBV5S1A1TA0A578 114 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 A8MUI8 341 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 PIK3R2O00459 728 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 PGK2P07205 417 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 IL1R2P27930 398 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 STAT5BP51692 787 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 HSDL1Q3SXM5 330 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 ZBED8Q8IZ13 594 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 UBR7Q8N806 425 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 CKAP2Q8WWK9 683 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 SLCO1B3Q9NPD5 702 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 EURLQ9NYK6 297 aa17.77■□□□□ 0.44
PHGDH-223ENST00000641597 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.43
PHGDH-223ENST00000641597 EXOC1LA0A1B0GW35 172 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 SOWAHBA6NEL2 793 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 PIGRP01833 764 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 ALDH5A1P51649 535 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-223ENST00000641597 TARBP2Q15633 366 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms