RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TUBGCP4Q9UGJ1 667 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 UBQLN1Q9UMX0 589 aaKnown RBP14.01□□□□□ -0.17
PHGDH-221ENST00000641573 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 MTCH2Q9Y6C9 303 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 DUSP10Q9Y6W6 482 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 RALGAPA2Q2PPJ7 1873 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 ATP8B3O60423 1300 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 MACROD2A1Z1Q3 448 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
PHGDH-221ENST00000641573 TLL1O43897 1013 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 MGEA5O60502 916 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 STAU1O95793 577 aaKnown RBP14□□□□□ -0.17
PHGDH-221ENST00000641573 CALCAP01258 141 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 MMEP08473 750 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 H2AFZP0C0S5 128 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 WEE2P0C1S8 567 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 CD58P19256 250 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 CCL23P55773 120 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 FMO1Q01740 532 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 H2AFVQ71UI9 128 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 MRPL10Q7Z7H8 261 aaKnown RBP14□□□□□ -0.17
PHGDH-221ENST00000641573 PALB2Q86YC2 1186 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 SLC35F6Q8N357 371 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 CAGE1Q8TC20 777 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 DDX1Q92499 740 aaKnown RBP14□□□□□ -0.17
PHGDH-221ENST00000641573 SECISBP2LQ93073 1101 aaKnown RBP14□□□□□ -0.17
PHGDH-221ENST00000641573 PCDHB18PQ96TA0 734 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 CISHQ9NSE2 258 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 INTUQ9ULD6 942 aa14□□□□□ -0.17
PHGDH-221ENST00000641573 TMCO5BA8MYB1 307 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 FANCGO15287 622 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 P4HA1P13674 534 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 POU3F3P20264 500 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-221ENST00000641573 RAP1GAPP47736 663 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 RAB27AP51159 221 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF132P52740 706 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 MYO1EQ12965 1108 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 BFSP2Q13515 415 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 MBTPS1Q14703 1052 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 DNAAF5Q86Y56 855 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 TRAIPQ9BWF2 469 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 BCO2Q9BYV7 579 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 SDCBP2Q9H190 292 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 CYP3A43Q9HB55 503 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 C11orf16Q9NQ32 467 aa13.99□□□□□ -0.17
PHGDH-221ENST00000641573 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
PHGDH-221ENST00000641573 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 RFXAPO00287 272 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 PPEF2O14830 753 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF623O75123 536 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 MOCS3O95396 460 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 CA3P07451 260 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 SELPP16109 830 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 CYP3A5P20815 502 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 GNA15P30679 374 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 GALCP54803 685 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 CDH8P55286 799 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 TNNC1P63316 161 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 LRRC8DQ7L1W4 858 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
PHGDH-221ENST00000641573 LRRC52Q8N7C0 313 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 LPPQ93052 612 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 ADAM2Q99965 735 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 SMYD3Q9H7B4 428 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 CERS4Q9HA82 394 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 TAS2R14Q9NYV8 317 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
PHGDH-221ENST00000641573 CITO14578 2027 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PIRO00625 290 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PTGESO14684 152 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 RTN2O75298 545 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 TACC1O75410 805 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 GZMAP12544 262 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 SKIP12755 728 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 SOX4Q06945 474 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 CLEC16AQ2KHT3 1053 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 ARNTL2Q8WYA1 636 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PGBD4Q96DM1 585 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 ZFP42Q96MM3 310 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 NOX5Q96PH1 765 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 RPS6KC1Q96S38 1066 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 GAD1Q99259 594 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 ISCUQ9H1K1 167 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PDCL3Q9H2J4 239 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 PUF60Q9UHX1 559 aaKnown RBP13.97□□□□□ -0.17
PHGDH-221ENST00000641573 SALL4Q9UJQ4 1053 aa13.97□□□□□ -0.17
PHGDH-221ENST00000641573 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms