RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PARP2Q9UGN5 583 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-216ENST00000641375 IPPQ9Y573 584 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 DNAH12Q6ZR08 3092 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 TMEM110-MUSTN1A8MSY1 372 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 MYO1FO00160 1098 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 SPOPO43791 374 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 KCNE1P15382 129 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 MMS22LQ6ZRQ5 1243 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 TFAP2BQ92481 460 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 ZSWIM1Q9BR11 485 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 SENP6Q9GZR1 1112 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-216ENST00000641375 PARVAQ9NVD7 372 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-216ENST00000641375 TMEM59LQ9UK28 342 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 SCN1AP35498 2009 aa17.47■□□□□ 0.39
PHGDH-216ENST00000641375 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 VGLL3A8MV65 326 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-216ENST00000641375 SLC1A1P43005 524 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 RNASE9P60153 205 aaKnown RBP17.46■□□□□ 0.39
PHGDH-216ENST00000641375 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-216ENST00000641375 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 PTGISQ16647 500 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 C8orf74Q6P047 294 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 CC2D1AQ6P1N0 951 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-216ENST00000641375 TMEM130Q8N3G9 435 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 SLC4A11Q8NBS3 891 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 KIAA1257Q9ULG3 409 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 CCDC188H7C350 402 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 VSNL1P62760 191 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 HACE1Q8IYU2 909 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 SMG8Q8ND04 991 aaKnown RBP17.46■□□□□ 0.39
PHGDH-216ENST00000641375 CD101Q93033 1021 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 BTBD6Q96KE9 485 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 CXCL16Q9H2A7 254 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 TUBGCP4Q9UGJ1 667 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 LCMT1Q9UIC8 334 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
PHGDH-216ENST00000641375 GPR182O15218 404 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 CHRNA1P02708 482 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 CYP3A5P20815 502 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 CTNNA2P26232 953 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 CTNNA1P35221 906 aaKnown RBP17.45■□□□□ 0.38
PHGDH-216ENST00000641375 MAMLD1Q13495 774 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 C1orf131Q8NDD1 294 aaKnown RBP17.45■□□□□ 0.38
PHGDH-216ENST00000641375 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
PHGDH-216ENST00000641375 LRRC1Q9BTT6 524 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 STRIP2Q9ULQ0 834 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 ATP8B1O43520 1251 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 CTSHP09668 335 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 VDRP11473 427 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 PNPLA4P41247 253 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 MGAT3Q09327 533 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 NFX1Q12986 1120 aaKnown RBP17.45■□□□□ 0.38
PHGDH-216ENST00000641375 C2CD6Q53TS8 623 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 DCAF12L1Q5VU92 463 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 ERICH1Q86X53 443 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 WNT8BQ93098 351 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 C18orf25Q96B23 403 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-216ENST00000641375 ZNF560Q96MR9 790 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 NT5C1AQ9BXI3 368 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 PCDHA3Q9Y5H8 950 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 SNX9Q9Y5X1 595 aa17.45■□□□□ 0.38
PHGDH-216ENST00000641375 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 HTTP42858 3142 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 THPOP40225 353 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 VEGFBP49765 207 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 PEX5P50542 639 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 ITGA7Q13683 1181 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 MAP9Q49MG5 647 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 ALG3Q92685 438 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 TWNKQ96RR1 684 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 PLVAPQ9BX97 442 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 KLK14Q9P0G3 267 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 HMGXB4Q9UGU5 601 aa17.44■□□□□ 0.38
PHGDH-216ENST00000641375 MOXD2PA6NHM9 499 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 KRIT1O00522 736 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 PIRO00625 290 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 ZRANB2O95218 330 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHGDH-216ENST00000641375 FGGP02679 453 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 NDST1P52848 882 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 ACLYP53396 1101 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 PRMT2P55345 433 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 TAP1Q03518 808 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 PTK7Q13308 1070 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 STILQ15468 1287 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 CNGA2Q16280 664 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 SGO2Q562F6 1265 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 FBXO47Q5MNV8 452 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 WDTC1Q8N5D0 677 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 SLAIN1Q8ND83 568 aa17.43■□□□□ 0.38
PHGDH-216ENST00000641375 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms