RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 GRIN3BO60391 1043 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 CHEK2O96017 543 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 TFRCP02786 760 aaKnown RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 SKIP12755 728 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 PPARGP37231 505 aaPredicted RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 CASP2P42575 452 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 LRRC55Q6ZSA7 311 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 SRLQ86TD4 932 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 TNFRSF25Q93038 417 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 ATXN7L3BQ96GX2 97 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 UBQLN1Q9UMX0 589 aaKnown RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 DFFAO00273 331 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 OAZ1P54368 228 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 MYL6P60660 151 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 ORC1Q13415 861 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 FSCBQ5H9T9 825 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 SPATA2LQ8IUW3 424 aaPredicted RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 HIPK4Q8NE63 616 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 SPATA20Q8TB22 786 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 GCNAQ96QF7 691 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 NOP53Q9NZM5 478 aaKnown RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 ARL2BPQ9Y2Y0 163 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 DDX3XO00571 662 aaKnown RBP eCLIP18.43■□□□□ 0.543e-14■■■■■ 29.4
SCARB2-223ENST00000640640 ZBTB24O43167 697 aaPredicted RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 DIAPH2O60879 1101 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 GLI1P08151 1106 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 PCSK1P29120 753 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 GRIK1P39086 918 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 RASIP1Q5U651 963 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 TTC8Q8TAM2 541 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 PARD3BQ8TEW8 1205 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 ALKBH8Q96BT7 664 aaKnown RBP18.43■□□□□ 0.54
SCARB2-223ENST00000640640 PPCSQ9HAB8 311 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 CISHQ9NSE2 258 aa18.43■□□□□ 0.54
SCARB2-223ENST00000640640 SMAPO00193 183 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 PSMD10O75832 226 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 SDCCAG3Q96C92 435 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 FAM129AQ9BZQ8 928 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 PRKAG2Q9UGJ0 569 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 CYP3A7-CYP3A51PA0A087WV96 503 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 ZNF189O75820 626 aaPredicted RBP18.42■□□□□ 0.54
SCARB2-223ENST00000640640 DDNO94850 711 aaPredicted RBP18.42■□□□□ 0.54
SCARB2-223ENST00000640640 CYP3A7P24462 503 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 TAF6P49848 677 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 BIRC2Q13490 618 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 EFHC1Q5JVL4 640 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
SCARB2-223ENST00000640640 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
SCARB2-223ENST00000640640 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 GTSE1Q9NYZ3 720 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 GGT7Q9UJ14 662 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 FRMD3A2A2Y4 597 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 KIZQ2M2Z5 673 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 FAM71DQ8N9W8 422 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 MIPOL1Q8TD10 442 aa18.42■□□□□ 0.54
SCARB2-223ENST00000640640 MMTAG2Q9BU76 263 aaKnown RBP18.42■□□□□ 0.54
SCARB2-223ENST00000640640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.42■□□□□ 0.544e-7■■□□□ 14.5
SCARB2-223ENST00000640640 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 PROSCO94903 275 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
SCARB2-223ENST00000640640 PNPLA4P41247 253 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 WDR49Q8IV35 697 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 ZNF518BQ9C0D4 1074 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 KCND1Q9NSA2 647 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 ANGPTL2Q9UKU9 493 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 USH1CQ9Y6N9 552 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 C3orf70A6NLC5 250 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-223ENST00000640640 GCKP35557 465 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 GTF2A2P52657 109 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 DCAF4L1Q3SXM0 396 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 KCNT1Q5JUK3 1230 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 ARL8AQ96BM9 186 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 ZFYVE28Q9HCC9 887 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 KLK14Q9P0G3 267 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 MED1Q15648 1581 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-223ENST00000640640 PJA2O43164 708 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 STAG3L1P0CL83 205 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 CNTN2Q02246 1040 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 CBWD6Q4V339 395 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 CBWD3Q5JTY5 395 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 CBWD5Q5RIA9 395 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 DISP2A7MBM2 1401 aa18.41■□□□□ 0.54
SCARB2-223ENST00000640640 A0A087WZ62 844 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CLGNO14967 610 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 VTNP04004 478 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 VDRP11473 427 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 STIP1P31948 543 aaKnown RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 LAMTOR4Q0VGL1 99 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 FDXACB1Q9BRP7 624 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 RAB21Q9UL25 225 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 KIAA1257Q9ULG3 409 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CSDE1O75534 798 aaKnown RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 SPAG6O75602 509 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 ARHGEF19Q8IW93 802 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 PPIL6Q8IXY8 311 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms