RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TAF2Q6P1X5 1199 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 FAM9AQ8IZU1 332 aaPredicted RBP6.24□□□□□ -1.41
CCDC7-216ENST00000640058 POC1BQ8TC44 478 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 VOPP1Q96AW1 172 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 ADARB2Q9NS39 739 aaKnown RBP6.24□□□□□ -1.41
CCDC7-216ENST00000640058 SEMA4GQ9NTN9 838 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 RLIMQ9NVW2 624 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 ST3GAL5Q9UNP4 418 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 PCDHA1Q9Y5I3 950 aa6.24□□□□□ -1.41
CCDC7-216ENST00000640058 E7ENX8 843 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 M0QYG6 137 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 ORC4O43929 436 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 C1QL1O75973 258 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 ARIH2O95376 493 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 C1RP00736 705 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 RHOP08100 348 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 ELFN1P0C7U0 828 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 GRIA3P42263 894 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 IL12RB1P42701 662 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 NDUFV1P49821 464 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 TAP2Q03519 686 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 HABP2Q14520 560 aaPredicted RBP6.23□□□□□ -1.41
CCDC7-216ENST00000640058 PGS1Q32NB8 556 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 TSTD2Q5T7W7 516 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 PPP1R3BQ86XI6 285 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 PRR18Q8N4B5 295 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 NELL1Q92832 810 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 HOOK2Q96ED9 719 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 PGBD1Q96JS3 809 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 CNPPD1Q9BV87 410 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 TINAGL1Q9GZM7 467 aaPredicted RBP6.23□□□□□ -1.41
CCDC7-216ENST00000640058 WDCPQ9H6R7 721 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 CPNE5Q9HCH3 593 aa6.23□□□□□ -1.41
CCDC7-216ENST00000640058 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
CCDC7-216ENST00000640058 POLR2AP24928 1970 aaKnown RBP6.23□□□□□ -1.41
CCDC7-216ENST00000640058 COL11A2P13942 1736 aaPredicted RBP6.22□□□□□ -1.41
CCDC7-216ENST00000640058 LINC00473A8K010 186 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 SLC16A6O15403 523 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 FTH1P19P0C7X4 201 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 PF4V1P10720 104 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 TYRP14679 529 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 KIF22Q14807 665 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 PCSK9Q8NBP7 692 aaKnown RBP6.22□□□□□ -1.41
CCDC7-216ENST00000640058 TPSD1Q9BZJ3 242 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 MRPL46Q9H2W6 279 aaKnown RBP6.22□□□□□ -1.41
CCDC7-216ENST00000640058 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 PNPOQ9NVS9 261 aa6.22□□□□□ -1.41
CCDC7-216ENST00000640058 H3BUI4 141 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 CHEK2O96017 543 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 GNAI2P04899 355 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
CCDC7-216ENST00000640058 ITIH3Q06033 890 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 EXOSC9Q06265 439 aaKnown RBP6.21□□□□□ -1.42
CCDC7-216ENST00000640058 PTPRRQ15256 657 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 NBPF8Q3BBV2 869 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 GRASPQ7Z6J2 395 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-216ENST00000640058 AMIGO2Q86SJ2 522 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 FAM46DQ8NEK8 389 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 UROC1Q96N76 676 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 BRINP2Q9C0B6 783 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 KMT5AQ9NQR1 393 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.21□□□□□ -1.42
CCDC7-216ENST00000640058 PCSK5Q92824 1860 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 ADGRA2Q96PE1 1338 aa6.21□□□□□ -1.42
CCDC7-216ENST00000640058 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 TRIAP1O43715 76 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
CCDC7-216ENST00000640058 ITGALP20701 1170 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 TOB1P50616 345 aaPredicted RBP6.2□□□□□ -1.42
CCDC7-216ENST00000640058 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
CCDC7-216ENST00000640058 USP37Q86T82 979 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 MVB12AQ96EY5 273 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 ACTRT3Q9BYD9 372 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 ZDHHC8Q9ULC8 765 aa6.2□□□□□ -1.42
CCDC7-216ENST00000640058 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 CCDC151A5D8V7 595 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 PDHA1P08559 390 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 NR2F6P10588 404 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 NXPH1P58417 271 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 ANAPC15P60006 121 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 EIF2B5Q13144 721 aaKnown RBP6.19□□□□□ -1.42
CCDC7-216ENST00000640058 BOP1Q14137 746 aaKnown RBP6.19□□□□□ -1.42
CCDC7-216ENST00000640058 COLEC12Q5KU26 742 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 VPS53Q5VIR6 699 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 CELF5Q8N6W0 485 aaKnown RBP6.19□□□□□ -1.42
CCDC7-216ENST00000640058 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 AMBRA1Q9C0C7 1298 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 SIK2Q9H0K1 926 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 ARMT1Q9H993 441 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 KLC4Q9NSK0 619 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 ARPP21Q9UBL0 812 aaPredicted RBP6.19□□□□□ -1.42
CCDC7-216ENST00000640058 ENTPD2Q9Y5L3 495 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 RAD54BQ9Y620 910 aa6.19□□□□□ -1.42
CCDC7-216ENST00000640058 HDCP19113 662 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 CD6P30203 668 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 GCLCP48506 637 aaPredicted RBP6.18□□□□□ -1.42
CCDC7-216ENST00000640058 ZNF267Q14586 743 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms