RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ATRIPQ8WXE1 791 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 POMGNT1Q8WZA1 660 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 HVCN1Q96D96 273 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 CLIC6Q96NY7 704 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 PRMT8Q9NR22 394 aaPredicted RBP18.24■□□□□ 0.51
SMN2-216ENST00000638794 DPP3Q9NY33 737 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
SMN2-216ENST00000638794 SRPRBQ9Y5M8 271 aaKnown RBP18.24■□□□□ 0.51
SMN2-216ENST00000638794 MYMKA6NI61 221 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 TAF6P49848 677 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 KCNA1Q09470 495 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 RESTQ13127 1097 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 GPIHBP1Q8IV16 184 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 EFCAB13Q8IY85 973 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 FAM3CQ92520 227 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 NELL1Q92832 810 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 E2F7Q96AV8 911 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 SEPT5Q99719 369 aaPredicted RBP18.23■□□□□ 0.51
SMN2-216ENST00000638794 PYM1Q9BRP8 204 aaKnown RBP18.23■□□□□ 0.51
SMN2-216ENST00000638794 MKNK1Q9BUB5 465 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 STRA6Q9BX79 667 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 ZCWPW1Q9H0M4 648 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 CHRDQ9H2X0 955 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 MRPL44Q9H9J2 332 aaKnown RBP18.23■□□□□ 0.51
SMN2-216ENST00000638794 ZSCAN32Q9NX65 697 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 HSFX1Q9UBD0 423 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 DSEQ9UL01 958 aa18.23■□□□□ 0.51
SMN2-216ENST00000638794 CYB561D2O14569 222 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 GABRR2P28476 465 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 POU5F1Q01860 360 aaKnown RBP18.22■□□□□ 0.51
SMN2-216ENST00000638794 CEBPZQ03701 1054 aaKnown RBP18.22■□□□□ 0.51
SMN2-216ENST00000638794 FCHO2Q0JRZ9 810 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 RRAGBQ5VZM2 374 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 ERMP1Q7Z2K6 904 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 ARID3BQ8IVW6 561 aaPredicted RBP18.22■□□□□ 0.51
SMN2-216ENST00000638794 YAF2Q8IY57 180 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 DNAJC19Q96DA6 116 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 BORCS6Q96GS4 357 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 ATXN3LQ9H3M9 355 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
SMN2-216ENST00000638794 DENND4CQ5VZ89 1909 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 KIF26AQ9ULI4 1882 aaPredicted RBP18.21■□□□□ 0.51
SMN2-216ENST00000638794 CHADO15335 359 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 GAP43P17677 238 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 ATF6P18850 670 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 SYT1P21579 422 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 CCNE1P24864 410 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 TXLNAP40222 546 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 WNT7BP56706 349 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 MGAT5BQ3V5L5 792 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 WSCD1Q658N2 575 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 METTL23Q86XA0 190 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 FAM200AQ8TCP9 573 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 CSGALNACT1Q8TDX6 532 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 RMDN1Q96DB5 314 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 LRRC3BQ96PB8 259 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 LMAN1LQ9HAT1 526 aa18.21■□□□□ 0.51
SMN2-216ENST00000638794 SLC38A8A6NNN8 435 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 LILRB5O75023 590 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 IL18RAPO95256 599 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 FGF19O95750 216 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 TDGF1P13385 188 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 TUFMP49411 452 aaKnown RBP18.2■□□□□ 0.5
SMN2-216ENST00000638794 CASP5P51878 434 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 POSTNQ15063 836 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 L1TD1Q5T7N2 865 aaKnown RBP18.2■□□□□ 0.5
SMN2-216ENST00000638794 LRRTM3Q86VH5 581 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 THEM5Q8N1Q8 247 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
SMN2-216ENST00000638794 KPNA7A9QM74 516 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 OBSL1O75147 1896 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 GCNT3O95395 438 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 PRAMEF12O95522 483 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 CHRNB1P11230 501 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 SOX9P48436 509 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
SMN2-216ENST00000638794 CYP4F8P98187 520 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 VEPH1Q14D04 833 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 SV2CQ496J9 727 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 ARHGAP15Q53QZ3 475 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 MAMSTRQ6ZN01 415 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 CCDC73Q6ZRK6 1079 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 NT5DC4Q86YG4 428 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 C2orf15Q8WU43 125 aaKnown RBP18.19■□□□□ 0.5
SMN2-216ENST00000638794 SAAL1Q96ER3 474 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 MSANTD3Q96H12 275 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 ZFYVE19Q96K21 471 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 FAM213AQ9BRX8 229 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 IER2Q9BTL4 223 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 FAM126AQ9BYI3 521 aaPredicted RBP18.19■□□□□ 0.5
SMN2-216ENST00000638794 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms