RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 OR10T2Q8NGX3 314 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TAS1R2Q8TE23 839 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ELMO3Q96BJ8 720 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 MMS19Q96T76 1030 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 RTP3Q9BQQ7 232 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 APOL5Q9BWW9 433 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 PLEKHA4Q9H4M7 779 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 VRTNQ9H8Y1 702 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 SFXN1Q9H9B4 322 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ANO10Q9NW15 660 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ABLIM3O94929 683 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ASS1P00966 412 aaKnown RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 OR4Q2P0C623 313 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 KCNQ1P51787 676 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TYRO3Q06418 890 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 CBWD6Q4V339 395 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ZNF667Q5HYK9 610 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 CBWD3Q5JTY5 395 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 CBWD5Q5RIA9 395 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 RARS2Q5T160 578 aaKnown RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TPGS2Q68CL5 300 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 C11orf57Q6ZUT1 292 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 DPH6Q7L8W6 267 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 OSTM1Q86WC4 334 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 C12orf76Q8N812 135 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ZNF461Q8TAF7 563 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 SPATA18Q8TC71 538 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 KBTBD7Q8WVZ9 684 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TAF4BQ92750 862 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 ASB2Q96Q27 587 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 TMEM209Q96SK2 561 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 S1PR5Q9H228 398 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
NECAP1-212ENST00000638787 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 MYL7Q01449 175 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 PUS10Q3MIT2 529 aaKnown RBP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 LIN9Q5TKA1 542 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 PTCRAQ6ISU1 281 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 SCARA5Q6ZMJ2 495 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 FBXL13Q8NEE6 735 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 CNOT6LQ96LI5 555 aaKnown RBP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 PI4K2AQ9BTU6 479 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 IMPG2Q9BZV3 1241 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 ZCWPW1Q9H0M4 648 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
NECAP1-212ENST00000638787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 DDX43Q9NXZ2 648 aaKnown RBP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 AFF4Q9UHB7 1163 aaKnown RBP9.5□□□□□ -0.89
NECAP1-212ENST00000638787 GABRDO14764 452 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 MBTPS2O43462 519 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 TACC1O75410 805 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 RFPL2O75678 378 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ZMYND10O75800 440 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 C8AP07357 584 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 P4HA1P13674 534 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ATF2P15336 505 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 WARSP23381 471 aaKnown RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ELF1P32519 619 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 LHX1P48742 406 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 FMO5P49326 533 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 NOP14P78316 857 aaKnown RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ITIH3Q06033 890 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 GPR17Q13304 367 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SLC39A12Q504Y0 691 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SPOPLQ6IQ16 392 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 TMC5Q6UXY8 1006 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 IRF2BP1Q8IU81 584 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SLC7A14Q8TBB6 771 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ACBD6Q9BR61 282 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ADAM7Q9H2U9 754 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SNX25Q9H3E2 840 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 THAP9Q9H5L6 903 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 C2orf16Q68DN1 1984 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 CCDC195A0A1B0GUA6 201 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 MTMR11A4FU01 709 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 HCRTO43612 131 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 N4BP1O75113 896 aaKnown RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 LRRN2O75325 713 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 LETM1O95202 739 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 SEC24AO95486 1093 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 VNN2O95498 520 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 FAM163BP0C2L3 166 aa9.49□□□□□ -0.89
NECAP1-212ENST00000638787 ACAT1P24752 427 aaKnown RBP9.49□□□□□ -0.89
NECAP1-212ENST00000638787 PCSK1P29120 753 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms