RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 PIRO00625 290 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 PTGESO14684 152 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 LSM8O95777 96 aaKnown RBP23.08■■□□□ 1.28
SCARB2-212ENST00000638663 MYCP01106 439 aaPredicted RBP23.08■■□□□ 1.28
SCARB2-212ENST00000638663 PAFAH1B1P43034 410 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 FAM26DQ5JW98 314 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 LIN9Q5TKA1 542 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 PPP1R2P3Q6NXS1 205 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 TMEM35BQ8NCS4 154 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 LPPQ93052 612 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 RPGRIP1Q96KN7 1286 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 BEGAINQ9BUH8 593 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 UNC93B1Q9H1C4 597 aa23.08■■□□□ 1.28
SCARB2-212ENST00000638663 FRMPD3Q5JV73 1810 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 BRCA2P51587 3418 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 MED7O43513 233 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 MGEA5O60502 916 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 ATF7P17544 494 aaPredicted RBP23.07■■□□□ 1.28
SCARB2-212ENST00000638663 C2orf54Q08AI8 447 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 CFAP221Q4G0U5 840 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 DENND1BQ6P3S1 775 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 HACE1Q8IYU2 909 aa23.07■■□□□ 1.28
SCARB2-212ENST00000638663 GPR161Q8N6U8 529 aaKnown RBP23.07■■□□□ 1.28
SCARB2-212ENST00000638663 A0A0U1RQG5 324 aaPredicted RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 KBTBD13C9JR72 458 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 CYP3A5P20815 502 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 MLH1P40692 756 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 C1QBPQ07021 282 aaKnown RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 PTP4A2Q12974 167 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 SLC43A3Q8NBI5 491 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 VCPIP1Q96JH7 1222 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 PBKQ96KB5 322 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 HEXIM2Q96MH2 286 aaKnown RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 MRPL45Q9BRJ2 306 aaKnown RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 RNF14Q9UBS8 474 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 CEP83Q9Y592 693 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 CKBP12277 381 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 IBSPP21815 317 aaPredicted RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 COMTP21964 271 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 MMP8P22894 467 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 RNASE9P60153 205 aaKnown RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 TUBB4BP68371 445 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 ZNF572Q7Z3I7 529 aaPredicted RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 TTC39CQ8N584 583 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 WDTC1Q8N5D0 677 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 PPP1R10Q96QC0 940 aaKnown RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 GAD1Q99259 594 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 ZNF518BQ9C0D4 1074 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 FAM124BQ9H5Z6 455 aaPredicted RBP23.06■■□□□ 1.28
SCARB2-212ENST00000638663 ANAPC7Q9UJX3 599 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 PHF24Q9UPV7 400 aa23.06■■□□□ 1.28
SCARB2-212ENST00000638663 CES2O00748 559 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 DDX3YO15523 660 aaKnown RBP23.05■■□□□ 1.28
SCARB2-212ENST00000638663 CEP104O60308 925 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 RHOXF2BP0C7M4 288 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 CDH5P33151 784 aaPredicted RBP23.05■■□□□ 1.28
SCARB2-212ENST00000638663 DPH6Q7L8W6 267 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 SPATA4Q8NEY3 305 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 ZNF560Q96MR9 790 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 RHOXF2Q9BQY4 288 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 NT5C1AQ9BXI3 368 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 TRIM7Q9C029 511 aa23.05■■□□□ 1.28
SCARB2-212ENST00000638663 SPTLC1O15269 473 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 DSC3Q14574 896 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 AGMOQ6ZNB7 445 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 CPNE8Q86YQ8 564 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 RNF216Q9NWF9 866 aaPredicted RBP23.04■■□□□ 1.28
SCARB2-212ENST00000638663 KPNA7A9QM74 516 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 ARVCFO00192 962 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 CAND2O75155 1236 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 VDRP11473 427 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 PNPLA4P41247 253 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 TAF6P49848 677 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 AFF1P51825 1210 aaKnown RBP23.04■■□□□ 1.28
SCARB2-212ENST00000638663 SOWAHAQ2M3V2 549 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 RNF169Q8NCN4 708 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 GSTCDQ8NEC7 633 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 RPS6KC1Q96S38 1066 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 ADAM2Q99965 735 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 SELENOOQ9BVL4 669 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 LHX5Q9H2C1 402 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 ANKZF1Q9H8Y5 726 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 PTPN22Q9Y2R2 807 aa23.04■■□□□ 1.28
SCARB2-212ENST00000638663 CALB1P05937 261 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 MAMLD1Q13495 774 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 SGO2Q562F6 1265 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 PLEKHA7Q6IQ23 1121 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 FBXO38Q6PIJ6 1188 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 MRPL10Q7Z7H8 261 aaKnown RBP23.03■■□□□ 1.28
SCARB2-212ENST00000638663 ERICH1Q86X53 443 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 PARD6BQ9BYG5 372 aa23.03■■□□□ 1.28
SCARB2-212ENST00000638663 MICAL2O94851 1124 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 RAB27AP51159 221 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 ITIH3Q06033 890 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 MTFR1Q15390 333 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 USP38Q8NB14 1042 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 MRPL47Q9HD33 250 aaKnown RBP23.02■■□□□ 1.28
SCARB2-212ENST00000638663 MIOSQ9NXC5 875 aa23.02■■□□□ 1.28
SCARB2-212ENST00000638663 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCARB2-212ENST00000638663 GIT1Q9Y2X7 761 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms