RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-233ENST00000638031 TSC2P49815 1807 aa20.3■□□□□ 0.84
CHRNA7-233ENST00000638031 FAM237AA0A1B0GTK4 181 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 GALR2O43603 387 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 GJA1P17302 382 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 EPHA5P54756 1037 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 STK4Q13043 487 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 BMT2Q1RMZ1 405 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 CSGALNACT2Q8N6G5 542 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 RDH13Q8NBN7 331 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 KXD1Q9BQD3 176 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 MTMR12Q9C0I1 747 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 INTS13Q9NVM9 706 aa20.29■□□□□ 0.84
CHRNA7-233ENST00000638031 ZFHX2Q9C0A1 2572 aaPredicted RBP20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 ZNF233A6NK53 670 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 H0Y858 1186 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 FCARP24071 287 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 NDUFA8P51970 172 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 KRT85P78386 507 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 SLC39A12Q504Y0 691 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 TANGO2Q6ICL3 276 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 STXBP4Q6ZWJ1 553 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 TMC8Q8IU68 726 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 KIAA0895Q8NCT3 520 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 FLCNQ8NFG4 579 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 ZNF512Q96ME7 567 aaPredicted RBP20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 GOLPH3LQ9H4A5 285 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 SLC2A4RGQ9NR83 387 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 TMLHEQ9NVH6 421 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 FAM86C1Q9NVL1 165 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 FBXL21Q9UKT6 434 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 CA14Q9ULX7 337 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
CHRNA7-233ENST00000638031 COL4A3Q01955 1670 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 KIAA0391O15091 583 aaKnown RBP20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 HCRTO43612 131 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 AOC1P19801 751 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 SV2CQ496J9 727 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 OSTM1Q86WC4 334 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 ZNF334Q9HCZ1 680 aaPredicted RBP20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 GDE1Q9NZC3 331 aa20.27■□□□□ 0.84
CHRNA7-233ENST00000638031 MICAL2O94851 1124 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 CST3P01034 146 aaPredicted RBP20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 CYP2J2P51589 502 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 CCDC142Q17RM4 750 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 KNOP1Q1ED39 458 aaKnown RBP20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 KMT5BQ4FZB7 885 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 FAM78AQ5JUQ0 283 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 LRRC52Q8N7C0 313 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 PLEKHO2Q8TD55 490 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 ZNF516Q92618 1163 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 ATOH1Q92858 354 aaPredicted RBP20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 ITGA11Q9UKX5 1188 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 DSEQ9UL01 958 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 NCANO14594 1321 aa20.26■□□□□ 0.83
CHRNA7-233ENST00000638031 MYL4P12829 197 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 ATF6P18850 670 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 IQCEQ6IPM2 695 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 MTSS1LQ765P7 747 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 PDZD4Q76G19 769 aaPredicted RBP20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 LIMS2Q7Z4I7 341 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 METTL23Q86XA0 190 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 SHKBP1Q8TBC3 707 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 PKMYT1Q99640 499 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 IRF2BPLQ9H1B7 796 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 UBE4BO95155 1302 aa20.25■□□□□ 0.83
CHRNA7-233ENST00000638031 ZNF197O14709 1029 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 KRT19P08727 400 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 PNPLA4P41247 253 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 RBP5P82980 135 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 CYP24A1Q07973 514 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 BFSP1Q12934 665 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 TEAD2Q15562 447 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 STXBP5Q5T5C0 1151 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 CYP4A22Q5TCH4 519 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 GAREM2Q75VX8 874 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 DNAJB7Q7Z6W7 309 aaPredicted RBP20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 C12orf56Q8IXR9 622 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 THEM5Q8N1Q8 247 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 XXYLT1Q8NBI6 393 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 ZNF560Q96MR9 790 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 ASB16Q96NS5 453 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 LPIN3Q9BQK8 851 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 KIAA1586Q9HCI6 787 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 HSFX1Q9UBD0 423 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 SNX9Q9Y5X1 595 aa20.24■□□□□ 0.83
CHRNA7-233ENST00000638031 TCHHQ07283 1943 aa20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 SHISA7A6NL88 538 aa20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 GABRDO14764 452 aa20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 ECI2O75521 394 aa20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 TMEM191BP0C7N4 346 aa20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 ACAT1P24752 427 aaKnown RBP20.23■□□□□ 0.83
CHRNA7-233ENST00000638031 EPHB3P54753 998 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms