RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 PTPN21Q16825 1174 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 MGAT5BQ3V5L5 792 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 SLC9A9Q8IVB4 645 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 ZDHHC14Q8IZN3 488 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 OR10T2Q8NGX3 314 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 ING5Q8WYH8 240 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 MFSD14AQ96MC6 490 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 ZNF512Q96ME7 567 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 RHOBTB2Q9BYZ6 727 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 DDX43Q9NXZ2 648 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 L1RE1Q9UN81 338 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 SLC27A5Q9Y2P5 690 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 MRPS23Q9Y3D9 190 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 YIPF1Q9Y548 306 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 PCDHA5Q9Y5H7 936 aa15.48■□□□□ 0.07
CACNA1A-249ENST00000637777 MTMR11A4FU01 709 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 LRRIQ3A6PVS8 624 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 RHOP08100 348 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 PTPN2P17706 415 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 ACAT1P24752 427 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 EPHB3P54753 998 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 UBE2HP62256 183 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 ADAM9Q13443 819 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 CYP4A22Q5TCH4 519 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 ZNF658Q5TYW1 1059 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 PDZD4Q76G19 769 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 FAM186BQ8IYM0 893 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 TMEM86AQ8N2M4 240 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 ATAD1Q8NBU5 361 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 MYADMQ96S97 322 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 GTPBP4Q9BZE4 634 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 ASAH2Q9NR71 780 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 DNMT3BQ9UBC3 853 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 NXF1Q9UBU9 619 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 MAFFQ9ULX9 164 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 SORCS3Q9UPU3 1222 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 TRAF3IP3Q9Y228 551 aa15.47■□□□□ 0.07
CACNA1A-249ENST00000637777 MYL4P12829 197 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 PCSK1P29120 753 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 PIK3CAP42336 1068 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 PRCPP42785 496 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 AP3M2P53677 418 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 VEPH1Q14D04 833 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 ZNF699Q32M78 642 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 WDR72Q3MJ13 1102 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 TOP6BLQ8N6T0 577 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 ST13P5Q8NFI4 369 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 PARD3BQ8TEW8 1205 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 BORCS6Q96GS4 357 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 ZCWPW1Q9H0M4 648 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 SNX25Q9H3E2 840 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 DMAC2Q9NW81 257 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 DOCK8Q8NF50 2099 aa15.46■□□□□ 0.07
CACNA1A-249ENST00000637777 BIN1O00499 593 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 PSMA7O14818 248 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 CETN3O15182 167 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 N4BP1O75113 896 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 SOAT2O75908 522 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 POU2F2P09086 479 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 EPB41P11171 864 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 PSMC2P35998 433 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 LHX1P48742 406 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 VAMP7P51809 220 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 MYL6P60660 151 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 ZXDAP98168 799 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 SCARA3Q6AZY7 606 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 SCARA5Q6ZMJ2 495 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 INTS8Q75QN2 995 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 ITFG1Q8TB96 612 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 EDAQ92838 391 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 EEF2KMTQ96G04 330 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 IMPG2Q9BZV3 1241 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 SLITRK6Q9H5Y7 841 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 CDH7Q9ULB5 785 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 PCDHB5Q9Y5E4 795 aa15.45■□□□□ 0.06
CACNA1A-249ENST00000637777 ZNF197O14709 1029 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 AKAP3O75969 853 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TRIM49P0CI25 452 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TRIM49CP0CI26 452 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 LAMP2P13473 410 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TUFMP49411 452 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 DLG4P78352 724 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 SMARCB1Q12824 385 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 NCOA4Q13772 614 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 CAMK4Q16566 473 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 ZNF667Q5HYK9 610 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 INTS6LQ5JSJ4 861 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TCERG1LQ5VWI1 586 aa15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 TDRD10Q5VZ19 366 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-249ENST00000637777 CENPPQ6IPU0 288 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms