RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SPTLC2O15270 562 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 SOAT2O75908 522 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 PSMC3P17980 439 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 GDI1P31150 447 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 MAGEA9P43362 315 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 WNT7BP56706 349 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 TFAMQ00059 246 aaKnown RBP21.68■■□□□ 1.06
CLN6-222ENST00000637667 SV2CQ496J9 727 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 SLC39A12Q504Y0 691 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 DNAJB7Q7Z6W7 309 aaPredicted RBP21.68■■□□□ 1.06
CLN6-222ENST00000637667 CCDC65Q8IXS2 484 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 THEM5Q8N1Q8 247 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 IRF7Q92985 503 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 PSMG2Q969U7 264 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 BORCS6Q96GS4 357 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 ZNF560Q96MR9 790 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 ZNF396Q96N95 335 aaPredicted RBP21.68■■□□□ 1.06
CLN6-222ENST00000637667 SPATA6Q9NWH7 488 aaPredicted RBP21.68■■□□□ 1.06
CLN6-222ENST00000637667 MRPS17Q9Y2R5 130 aaKnown RBP21.68■■□□□ 1.06
CLN6-222ENST00000637667 R4GN57 208 aa21.68■■□□□ 1.06
CLN6-222ENST00000637667 KPNA7A9QM74 516 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 TULP1O00294 542 aaPredicted RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 LDHAP00338 332 aaKnown RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 PNPLA4P41247 253 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 TUFMP49411 452 aaKnown RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 ITIH5Q86UX2 942 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 MAML2Q8IZL2 1156 aaPredicted RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 ADSSL1Q8N142 457 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 SNX21Q969T3 373 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 CLDN23Q96B33 292 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 SEPT5Q99719 369 aaPredicted RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 CBWD1Q9BRT8 395 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 TMEM206Q9H813 350 aa21.67■■□□□ 1.06
CLN6-222ENST00000637667 ZNF334Q9HCZ1 680 aaPredicted RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 RBAKQ9NYW8 714 aaPredicted RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 TFIP11Q9UBB9 837 aaKnown RBP21.67■■□□□ 1.06
CLN6-222ENST00000637667 ANK1P16157 1881 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 OTOGLQ3ZCN5 2332 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 NCANO14594 1321 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 GOLGA8IPA6NC78 632 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 SHISA7A6NL88 538 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 GOLGA8JA6NMD2 632 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 HEPACAM2A8MVW5 462 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 NCAM2O15394 837 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 EXTL3O43909 919 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 PPP6R2O75170 966 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 PRPF6O94906 941 aaKnown RBP21.66■■□□□ 1.06
CLN6-222ENST00000637667 FGF19O95750 216 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 POLR2BP30876 1174 aaKnown RBP21.66■■□□□ 1.06
CLN6-222ENST00000637667 SMARCB1Q12824 385 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 MGAT5BQ3V5L5 792 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 ZC3H14Q6PJT7 736 aaKnown RBP21.66■■□□□ 1.06
CLN6-222ENST00000637667 GAREM2Q75VX8 874 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 MFSD6LQ8IWD5 586 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 KCNG4Q8TDN1 519 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 E2F7Q96AV8 911 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 TNMDQ9H2S6 317 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 TRPV5Q9NQA5 729 aa21.66■■□□□ 1.06
CLN6-222ENST00000637667 MAN2B1O00754 1011 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 LAMTOR5O43504 91 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 LMNAP02545 664 aaKnown RBP21.65■■□□□ 1.06
CLN6-222ENST00000637667 CDR1P51861 262 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 VEPH1Q14D04 833 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 E2F4Q16254 413 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 STXBP5Q5T5C0 1151 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 LRRTM3Q86VH5 581 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 C1orf127Q8N9H9 656 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 FAM200AQ8TCP9 573 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 C2orf15Q8WU43 125 aaKnown RBP21.65■■□□□ 1.06
CLN6-222ENST00000637667 CACTINQ8WUQ7 758 aaKnown RBP21.65■■□□□ 1.06
CLN6-222ENST00000637667 RSPRY1Q96DX4 576 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 LPIN3Q9BQK8 851 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 LRRC27Q9C0I9 530 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 ATXN3LQ9H3M9 355 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 PCIF1Q9H4Z3 704 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 KBTBD4Q9NVX7 518 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 AGAP1Q9UPQ3 857 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 DMDP11532 3685 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 MIA3Q5JRA6 1907 aa21.65■■□□□ 1.06
CLN6-222ENST00000637667 ZNF263O14978 683 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 YEATS4O95619 227 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 ITGB3P05106 788 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 ATF6P18850 670 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 GABRR2P28476 465 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 RPS9P46781 194 aaKnown RBP21.64■■□□□ 1.05
CLN6-222ENST00000637667 STXBP4Q6ZWJ1 553 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 ARID3BQ8IVW6 561 aaPredicted RBP21.64■■□□□ 1.05
CLN6-222ENST00000637667 DCP1BQ8IZD4 617 aaKnown RBP21.64■■□□□ 1.05
CLN6-222ENST00000637667 SPPL2BQ8TCT7 592 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 NOC3LQ8WTT2 800 aaKnown RBP21.64■■□□□ 1.05
CLN6-222ENST00000637667 MKNK1Q9BUB5 465 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 TRIM9Q9C026 710 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 CUEDC2Q9H467 287 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 PDE11AQ9HCR9 933 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 FBXO4Q9UKT5 387 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 ZNF292O60281 2723 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 TSC2P49815 1807 aa21.64■■□□□ 1.05
CLN6-222ENST00000637667 KIAA0391O15091 583 aaKnown RBP21.63■■□□□ 1.05
CLN6-222ENST00000637667 CUTAO60888 179 aa21.63■■□□□ 1.05
CLN6-222ENST00000637667 HAPLN1P10915 354 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms