RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 ZNF606Q8WXB4 792 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 TFAP2BQ92481 460 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 MMS19Q96T76 1030 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 MRPL45Q9BRJ2 306 aaKnown RBP17.84■□□□□ 0.45
CLCN2-220ENST00000637538 CACNG4Q9UBN1 327 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 SALL4Q9UJQ4 1053 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 NME7Q9Y5B8 376 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 LTBP2Q14767 1821 aa17.84■□□□□ 0.45
CLCN2-220ENST00000637538 TIMP1P01033 207 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 CFHP08603 1231 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 H2AFZP0C0S5 128 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 FAM163BP0C2L3 166 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 FGFR1P11362 822 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 UNGP13051 313 aaPredicted RBP17.83■□□□□ 0.45
CLCN2-220ENST00000637538 NDST1P52848 882 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 ZNF394Q53GI3 561 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 NOMO2Q5JPE7 1267 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 H2AFVQ71UI9 128 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 DDX27Q96GQ7 796 aaKnown RBP17.83■□□□□ 0.45
CLCN2-220ENST00000637538 UROC1Q96N76 676 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 MYO1AQ9UBC5 1043 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 L1RE1Q9UN81 338 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 INPP5FQ9Y2H2 1132 aa17.83■□□□□ 0.45
CLCN2-220ENST00000637538 THAP12O43422 761 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 B4GALT3O60512 393 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 RTN2O75298 545 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 TMEM253P0C7T8 217 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 GALCP54803 685 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 CNKSR3Q6P9H4 555 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 TRIM72Q6ZMU5 477 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 DPH6Q7L8W6 267 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 DEFB128Q7Z7B8 93 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 TOP6BLQ8N6T0 577 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 TMEM176AQ96HP8 235 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 WDR24Q96S15 920 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 SEPT11Q9NVA2 429 aaKnown RBP17.82■□□□□ 0.44
CLCN2-220ENST00000637538 GUCA1BQ9UMX6 200 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 PCDHGC3Q9UN70 934 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 NCANO14594 1321 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 IBSPP21815 317 aaPredicted RBP17.82■□□□□ 0.44
CLCN2-220ENST00000637538 BRD2P25440 801 aaKnown RBP17.82■□□□□ 0.44
CLCN2-220ENST00000637538 UNC93AQ86WB7 457 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 CASD1Q96PB1 797 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 TBC1D13Q9NVG8 400 aa17.82■□□□□ 0.44
CLCN2-220ENST00000637538 ALPK3Q96L96 1907 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 A0A0A6YYK5 440 aaPredicted RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 ANKRD62A6NC57 917 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 H0YGN5 161 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 KIF5CO60282 957 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 FTLP02792 175 aaPredicted RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 WARSP23381 471 aaKnown RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 PAX3P23760 479 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 CDH5P33151 784 aaPredicted RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 GNG11P61952 73 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 NOMO3P69849 1222 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 CENPCQ03188 943 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 DNTTIP2Q5QJE6 756 aaKnown RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 ACAD10Q6JQN1 1059 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 SYT10Q6XYQ8 523 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 NPAS4Q8IUM7 802 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
CLCN2-220ENST00000637538 APPL2Q8NEU8 664 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 CYFIP2Q96F07 1278 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 NT5C1AQ9BXI3 368 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 KANSL3Q9P2N6 904 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 KIAA1257Q9ULG3 409 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 PCDHB7Q9Y5E2 793 aa17.81■□□□□ 0.44
CLCN2-220ENST00000637538 TSC2P49815 1807 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 COL4A6Q14031 1691 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 TMCO5BA8MYB1 307 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 GABRDO14764 452 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 DDHD2O94830 711 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 LSM8O95777 96 aaKnown RBP17.8■□□□□ 0.44
CLCN2-220ENST00000637538 VDRP11473 427 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 ORC1Q13415 861 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 TCEAL1Q15170 157 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 COLGALT2Q8IYK4 626 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 SECISBP2LQ93073 1101 aaKnown RBP17.8■□□□□ 0.44
CLCN2-220ENST00000637538 SENP8Q96LD8 212 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 THAP2Q9H0W7 228 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
CLCN2-220ENST00000637538 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 O00370 1275 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 CYB561D2O14569 222 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 HOXA2O43364 376 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 HUS1O60921 280 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 ZNF569Q5MCW4 686 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 OSTM1Q86WC4 334 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 C7orf61Q8IZ16 206 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 CRYBG2Q8N1P7 616 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 RABGGTAQ92696 567 aa17.79■□□□□ 0.44
CLCN2-220ENST00000637538 LHX5Q9H2C1 402 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms