RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 HADHBP55084 474 aaKnown RBP16.35■□□□□ 0.21
CLN6-219ENST00000637329 STILQ15468 1287 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 ACAD10Q6JQN1 1059 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 RHOT2Q8IXI1 618 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 SLC35F6Q8N357 371 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 URGCPQ8TCY9 931 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 DIS3LQ8TF46 1054 aaKnown RBP16.35■□□□□ 0.21
CLN6-219ENST00000637329 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
CLN6-219ENST00000637329 TMEM176AQ96HP8 235 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 WDR24Q96S15 920 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 MMS19Q96T76 1030 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 PCDHB18PQ96TA0 734 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 NAPGQ99747 312 aaPredicted RBP16.35■□□□□ 0.21
CLN6-219ENST00000637329 ZNF518BQ9C0D4 1074 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 GTF3C4Q9UKN8 822 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 PCDHGC5Q9Y5F6 944 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
CLN6-219ENST00000637329 CTAGE9A4FU28 777 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 PODXLO00592 558 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 HOXA2O43364 376 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 CLTBP09497 229 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 CDH5P33151 784 aaPredicted RBP16.34■□□□□ 0.21
CLN6-219ENST00000637329 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
CLN6-219ENST00000637329 RAD23BP54727 409 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 LILRA4P59901 499 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 NOMO3P69849 1222 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 TUSC3Q13454 348 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 GPNMBQ14956 572 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 TMEM130Q8N3G9 435 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 SLC4A11Q8NBS3 891 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 WHAMMQ8TF30 809 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 ZNF606Q8WXB4 792 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 ZNF592Q92610 1267 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 NT5C1AQ9BXI3 368 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 IRX2Q9BZI1 471 aaPredicted RBP16.34■□□□□ 0.21
CLN6-219ENST00000637329 PDCL3Q9H2J4 239 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 GOLGA2P5Q9HBQ8 144 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 TAS2R14Q9NYV8 317 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 DUSP10Q9Y6W6 482 aa16.34■□□□□ 0.21
CLN6-219ENST00000637329 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
CLN6-219ENST00000637329 HUS1O60921 280 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 MTA2O94776 668 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 FTLP02792 175 aaPredicted RBP16.33■□□□□ 0.2
CLN6-219ENST00000637329 VDRP11473 427 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 AARSP49588 968 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■■■ 41.2
CLN6-219ENST00000637329 CDH8P55286 799 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 GPC5P78333 572 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 TUBB2AQ13885 445 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.2
CLN6-219ENST00000637329 TMEM86AQ8N2M4 240 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 APPL2Q8NEU8 664 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 VCPIP1Q96JH7 1222 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 TUBB2BQ9BVA1 445 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 AVENQ9NQS1 362 aaPredicted RBP16.33■□□□□ 0.2
CLN6-219ENST00000637329 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 CAPN6Q9Y6Q1 641 aa16.33■□□□□ 0.2
CLN6-219ENST00000637329 ARHGEF37A1IGU5 675 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 TDRD15B5MCY1 1934 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 SPTLC1O15269 473 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 FANCGO15287 622 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 MOCS3O95396 460 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 BRD2P25440 801 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 TSC2P49815 1807 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 NDST1P52848 882 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 UPP1Q16831 310 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 ZNF394Q53GI3 561 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 NOMO2Q5JPE7 1267 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 MON1BQ7L1V2 547 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 PHF13Q86YI8 300 aaPredicted RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 ELOVL4Q9GZR5 314 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 THAP2Q9H0W7 228 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 UVRAGQ9P2Y5 699 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
CLN6-219ENST00000637329 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 JRKLQ9Y4A0 524 aa16.32■□□□□ 0.2
CLN6-219ENST00000637329 SCN1AP35498 2009 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 TMEM189-UBE2V1I3L0A0 370 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 CYP1A2P05177 515 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 CD19P15391 556 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 ABCB4P21439 1286 aa16.31■□□□□ 0.2
CLN6-219ENST00000637329 CLCNKBP51801 687 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms