RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 ARHGAP4P98171 946 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 LRRC63Q05C16 580 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PDE4DQ08499 809 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 MAPK7Q13164 816 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PTGDRQ13258 359 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 MIIPQ5JXC2 388 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PPP1R2P3Q6NXS1 205 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ISLR2Q6UXK2 745 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ANKRD13BQ86YJ7 626 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 MCF2L2Q86YR7 1114 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 ALLCQ8N6M5 410 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 FANCBQ8NB91 859 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 NUF2Q9BZD4 464 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 OSBPL8Q9BZF1 889 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 PARVGQ9HBI0 331 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 SIK3Q9Y2K2 1263 aa7.19□□□□□ -1.26
SCN1A-213ENST00000636759 BAZ2BQ9UIF8 2168 aaKnown RBP7.19□□□□□ -1.26
SCN1A-213ENST00000636759 A0A087X0T9 212 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 GSTTP1A0A1W2PQM5 241 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 H3BSA7 217 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 THAP12O43422 761 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CDH16O75309 829 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 IDH1O75874 414 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 DDHD2O94830 711 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FARP2O94887 1054 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FAM228BP0C875 321 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 TCEA1P23193 301 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PMLP29590 882 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 BCAMP50895 628 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 HSD17B4P51659 736 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 STAT2P52630 851 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 AQP4P55087 323 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RPL26P61254 145 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 KRT76Q01546 638 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FOLH1Q04609 750 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 MPP2Q14168 576 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 TNIP1Q15025 636 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 TRIM16LQ309B1 348 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 IYDQ6PHW0 289 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RHOT2Q8IXI1 618 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RASGEF1CQ8N431 466 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RIN3Q8TB24 985 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF398Q8TD17 642 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PPP4R1Q8TF05 950 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 GDPD5Q8WTR4 605 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 NGLY1Q96IV0 654 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 BTBD9Q96Q07 612 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 GPAMQ9HCL2 828 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 HEY2Q9UBP5 337 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 WDR91A4D1P6 747 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ARHGAP42A6NI28 874 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 GMNNO75496 209 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ZBTB11O95625 1053 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CHRNB1P11230 501 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PTK7Q13308 1070 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PRKG1Q13976 671 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RRP1BQ14684 758 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 SFT2D3Q587I9 215 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 GJC2Q5T442 439 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ANKRD40Q6AI12 368 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 BORAQ6PGQ7 559 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ZDHHC24Q6UX98 284 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CATIPQ7Z7H3 387 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF410Q86VK4 478 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FAM20CQ8IXL6 584 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 MAGEB6Q8N7X4 407 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 OR7G1Q8NGA0 311 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 BAP1Q92560 729 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 BIRC8Q96P09 236 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 THTPAQ9BU02 230 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CNNM2Q9H8M5 875 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FKBP14Q9NWM8 211 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ANKFY1Q9P2R3 1169 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 USP21Q9UK80 565 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PPM1HQ9ULR3 514 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 MINPP1Q9UNW1 487 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PCDHB2Q9Y5E7 798 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 H3BRJ5 948 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CASQ2O14958 399 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 KMOO15229 486 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 MAGEC1O60732 1142 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PLEKHA8P1O95397 391 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FUCA1P04066 466 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 SMIM18P0DKX4 95 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 HSPA1AP0DMV8 641 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 HSPA1BP0DMV9 641 aaKnown RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PIM1P11309 404 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 PTPN2P17706 415 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 FLT1P17948 1338 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CDH2P19022 906 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-213ENST00000636759 COPB2P35606 906 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 CPA2P48052 419 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RAP1GDS1P52306 607 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 TMED2Q15363 201 aa7.18□□□□□ -1.26
SCN1A-213ENST00000636759 RGS21Q2M5E4 152 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms