RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZFYVE16Q7Z3T8 1539 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 CCR4P51679 360 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF445P59923 1031 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 NR1H3Q13133 447 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 PPP1R2P3Q6NXS1 205 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 SYTL1Q8IYJ3 562 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 ZC3H7BQ9UGR2 993 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 CHMP2BQ9UQN3 213 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 DSG3P32926 999 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 C2CD6Q53TS8 623 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 CCDC60Q8IWA6 550 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 TUBB6Q9BUF5 446 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 HEG1Q9ULI3 1381 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 PRIM2P49643 509 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 MARSP56192 900 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 TMEM39AQ9NV64 488 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 IL1RAPL1Q9NZN1 696 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 PCDHA10Q9Y5I2 948 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 TBKBP1A7MCY6 615 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 LINC00301Q8NCQ3 95 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 GPRC5AQ8NFJ5 357 aa18.63■□□□□ 0.57
CACNA1A-227ENST00000636549 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SCP2P22307 547 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 CPT1AP50416 773 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SRSF11Q05519 484 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 LRRC63Q05C16 580 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 KRT39Q6A163 491 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 KRT84Q9NSB2 600 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 TRPC4Q9UBN4 977 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 DAB1O75553 588 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 DENND5BQ6ZUT9 1274 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 RNF44Q7L0R7 432 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 RBM23Q86U06 439 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 TTC13Q8NBP0 860 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 RABGGTAQ92696 567 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 CYP4F12Q9HCS2 524 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 ASAP2O43150 1006 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 TCEA1P23193 301 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 POU4F1Q01851 419 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 HIST2H2ACQ16777 129 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 HIST2H2AA3Q6FI13 130 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 MYO3BQ8WXR4 1341 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SMPD4Q9NXE4 827 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 TAL1P17542 331 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 STIP1P31948 543 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SCNN1BP51168 640 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 AAASQ9NRG9 546 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 DCDC2CA8MYV0 355 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 PSMD12O00232 456 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 CAND2O75155 1236 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 MYL2P10916 166 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SFNP31947 248 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 EFEMP1Q12805 493 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 ATF7IP2Q5U623 682 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 RPRD1AQ96P16 312 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 TRIM8Q9BZR9 551 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 CEP72Q9P209 647 aa18.62■□□□□ 0.57
CACNA1A-227ENST00000636549 SYNGAP1Q96PV0 1343 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 NCOA4Q13772 614 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 COG2Q14746 738 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 NFIL3Q16649 462 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 CLEC16AQ2KHT3 1053 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 MTERF3Q96E29 417 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 FHDC1Q9C0D6 1143 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 DDX56Q9NY93 547 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 TSC22D3Q99576 134 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 CNOT10Q9H9A5 744 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 METP08581 1390 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 DPEP1P16444 411 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 GRK2P25098 689 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 PLA2G4AP47712 749 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 HDAC4P56524 1084 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 C18orf8Q96DM3 657 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 GLT1D1Q96MS3 346 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 MYOCQ99972 504 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 ALKBH4Q9NXW9 302 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 RNF112Q9ULX5 631 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 TPST1O60507 370 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 TRMT11Q7Z4G4 463 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 TUBGCP3Q96CW5 907 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 OSBPL1AQ9BXW6 950 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 TMEM132BQ14DG7 1078 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 OLFML2BQ68BL8 750 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 CLYBLQ8N0X4 340 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 POLG2Q9UHN1 485 aa18.61■□□□□ 0.57
CACNA1A-227ENST00000636549 FOXN1O15353 648 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SRP72O76094 671 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SERPINB3P29508 390 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SKIV2L2P42285 1042 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 POLD3Q15054 466 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 FBXO32Q969P5 355 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 RGS5O15539 181 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 NDUFS2O75306 463 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 CPA2P48052 419 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 RBBP4Q09028 425 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SLC44A4Q53GD3 710 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms