RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 TOR4AQ9NXH8 423 aa13.65□□□□□ -0.22
SPTAN1-230ENST00000636257 MMP17Q9ULZ9 603 aa13.65□□□□□ -0.22
SPTAN1-230ENST00000636257 KNTC1P50748 2209 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 EML1O00423 815 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 ALDH1A2O94788 518 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 VNN2O95498 520 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 CPB1P15086 417 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 ARSAP15289 507 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 GABRR2P28476 465 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 CRY1Q16526 586 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 MAP7D1Q3KQU3 841 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 WHAMMQ8TF30 809 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 DNMT3LQ9UJW3 386 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
SPTAN1-230ENST00000636257 N4BP3O15049 544 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 AP5Z1O43299 807 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 GNA11P29992 359 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 XKR9Q5GH70 373 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 OTUD6AQ7L8S5 288 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 C4orf19Q8IY42 314 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 ETNPPLQ8TBG4 499 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 CCDC12Q8WUD4 166 aaPredicted RBP13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 WBP1Q96G27 269 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 CRISPLD1Q9H336 500 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 FLNCQ14315 2725 aa13.63□□□□□ -0.23
SPTAN1-230ENST00000636257 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 MARCH6O60337 910 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 HLA-EP13747 358 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 HNRNPLP14866 589 aaKnown RBP eCLIP13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 GLRA2P23416 452 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 ARL2P36404 184 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CSRP3P50461 194 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CYP4F8P98187 520 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 PDGFRLQ15198 375 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 RTN1Q16799 776 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 C2orf27AQ580R0 203 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 TMEM92Q6UXU6 159 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 SYNE3Q6ZMZ3 975 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CMTM8Q8IZV2 173 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CPA6Q8N4T0 437 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 BAHD1Q8TBE0 780 aaPredicted RBP13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 BICD2Q8TD16 824 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 SLC46A2Q9BY10 475 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 GDAQ9Y2T3 454 aa13.62□□□□□ -0.23
SPTAN1-230ENST00000636257 CITO14578 2027 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 FAM149AA5PLN7 773 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 TTLL13PA6NNM8 815 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 PODXLO00592 558 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 TLX3O43711 291 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 DUSP4Q13115 394 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 FAM187BQ17R55 369 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 USP13Q92995 863 aaPredicted RBP13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 SUSD3Q96L08 255 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 LXNQ9BS40 222 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 ECT2Q9H8V3 914 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 KIF9Q9HAQ2 790 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
SPTAN1-230ENST00000636257 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 K7EQS6 105 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 TDP2O95551 362 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 ATXN1LP0C7T5 689 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 ANK1P16157 1881 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 CYP3A7P24462 503 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 CDC25CP30307 473 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 SEC13P55735 322 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 RPL6Q02878 288 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 ZNF33AQ06730 810 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 SMAD1Q15797 465 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 COLEC12Q5KU26 742 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 RIN3Q8TB24 985 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 SETD7Q8WTS6 366 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 NXPE2Q96DL1 559 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 ADPGKQ9BRR6 497 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
SPTAN1-230ENST00000636257 FZD8Q9H461 694 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms