RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MYO1CO00159 1063 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 LSP1P33241 339 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FAM187BQ17R55 369 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 METTL23Q86XA0 190 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 RAB3IPQ96QF0 476 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 XPO6Q96QU8 1125 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ACO2Q99798 780 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CNPY3Q9BT09 278 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 NAT9Q9BTE0 207 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PDLIM7Q9NR12 457 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CISHQ9NSE2 258 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FAM169AQ9Y6X4 670 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SLC15A5A6NIM6 579 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 M0QYV0 167 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF862O60290 1169 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SPARCL1Q14515 664 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CDCA2Q69YH5 1023 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GPAT2Q6NUI2 795 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SLC47A2Q86VL8 602 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 IFNLR1Q8IU57 520 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 KSR1Q8IVT5 923 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ASAP3Q8TDY4 903 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MRGBPQ9NV56 204 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MYH2Q9UKX2 1941 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ABL1P00519 1130 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SKIP12755 728 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 KCNA3P22001 575 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 EPHX2P34913 555 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GARSP41250 739 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MAGOHP61326 146 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PLEKHH3Q7Z736 793 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TADA2BQ86TJ2 420 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PPIL6Q8IXY8 311 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 STK32AQ8WU08 396 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM176AQ96HP8 235 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GPR20Q99678 358 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 BRD8Q9H0E9 1235 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FZD8Q9H461 694 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CNTN6Q9UQ52 1028 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MYH13Q9UKX3 1938 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ZBTB39O15060 712 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SCNN1AP37088 669 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 DLG4P78352 724 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MTA1Q13330 715 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PDCLQ13371 301 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 UGCGQ16739 394 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC8CQ8TDW0 803 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PYROXD1Q8WU10 500 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC39Q96DD0 335 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 DCLK3Q9C098 648 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CPSF3Q9UKF6 684 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CHD4Q14839 1912 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 BAZ2AQ9UIF9 1905 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 A0A0U1RQJ8 604 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 O00370 1275 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PSMD3O43242 534 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GPD1P21695 349 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GRM5P41594 1212 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 COG7P83436 770 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PTPN11Q06124 597 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SLC27A1Q6PCB7 646 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CYFIP2Q96F07 1278 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC4Q9HBW1 653 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 BARX2Q9UMQ3 279 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 UBR3Q6ZT12 1888 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 I3L4J1 428 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 USP2O75604 605 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 DCTN3O75935 186 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TTC4O95801 387 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GSTA1P08263 222 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 INHBAP08476 426 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PDE4CQ08493 712 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ITIH4Q14624 930 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 NIPA2Q8N8Q9 360 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FBXO25Q8TCJ0 367 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 KREMEN1Q96MU8 473 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 DDX60LQ5H9U9 1706 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 H7C0C1 242 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FANCGO15287 622 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FBXO21O94952 628 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SRGAP2BP0DMP2 458 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ZBTB48P10074 688 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GHRP10912 638 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 ATP5OP48047 213 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SERPINB9P50453 376 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 IGBP1P78318 339 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 RASA2Q15283 850 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TARBP2Q15633 366 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SPOCD1Q6ZMY3 1216 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 RBM15Q96T37 977 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 FETUBQ9UGM5 382 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 AGAP1Q9UPQ3 857 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SIGLEC16A6NMB1 481 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GOLGA8SH3BPF8 625 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TGM2P21980 687 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 MMP8P22894 467 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms