RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PNKPQ96T60 521 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 LXNQ9BS40 222 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 C20orf96Q9NUD7 363 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PCDH8O95206 1070 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 RPN2P04844 631 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 GRK4P32298 578 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 FEN1P39748 380 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 STX5Q13190 355 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 TKFCQ3LXA3 575 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NOL9Q5SY16 702 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SYCP2LQ5T4T6 812 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PEG10Q86TG7 708 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 RTL3Q8N8U3 475 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SH3RF3Q8TEJ3 882 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 TASP1Q9H6P5 420 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 ITIH6Q6UXX5 1313 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 TIPRLO75663 272 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SRP72O76094 671 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 FTLP02792 175 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 RPLP2P05387 115 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PDHA1P08559 390 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NOS3P29474 1203 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SERPINB9P50453 376 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SEMA3FQ13275 785 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 GNA13Q14344 377 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CNGA2Q16280 664 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PLA2G4FQ68DD2 849 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 POTEAQ6S8J7 498 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 OTUD7AQ8TE49 926 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CARD14Q9BXL6 1004 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 KLHL3Q9UH77 587 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 C19orf81C9J6K1 198 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 RHOBTB1O94844 696 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NUDT14O95848 222 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 URODP06132 367 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CLTBP09497 229 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PPP2R1BP30154 601 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 TALDO1P37837 337 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CAMK1DQ8IU85 385 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SPRTNQ9H040 489 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.79□□□□□ -1.483e-7■■■□□ 19
SCN1A-209ENST00000635750 ADAMTS1Q9UHI8 967 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 KLHL20Q9Y2M5 609 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 H0Y3Z8 333 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 WWP2O00308 870 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 HS6ST1O60243 411 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 IFNA14P01570 189 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PSMC6P62333 389 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 STX4Q12846 297 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 COG2Q14746 738 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PDK1Q15118 436 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 TMEM154Q6P9G4 183 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CLEC4GQ6UXB4 293 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 RIN3Q8TB24 985 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PAGE5Q96GU1 130 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF668Q96K58 619 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SMAD5Q99717 465 aaKnown RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SIKE1Q9BRV8 207 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 THTPAQ9BU02 230 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PNMA8BQ9ULN7 279 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 GPR182O15218 404 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 POLBP06746 335 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 FLT3P36888 993 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SESN2P58004 480 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 C4orf22Q6V702 233 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 ARHGEF26Q96DR7 871 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SERPINB12Q96P63 405 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 MCCC1Q96RQ3 725 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-209ENST00000635750 OLFM1Q99784 485 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 OSGEPL1Q9H4B0 414 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NAGPAQ9UK23 515 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 AGAP1Q9UPQ3 857 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 ERBB3P21860 1342 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 MGAT4DA6NG13 374 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SOWAHDA6NJG2 315 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 F5H5T6 163 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SASH1O94885 1247 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 PTH1RQ03431 593 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SLC45A4Q5BKX6 768 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 BTN2A1Q7KYR7 527 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 LCORLQ8N3X6 602 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 KIFC1Q9BW19 673 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 CHST12Q9NRB3 414 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 VPS51Q9UID3 782 aa5.79□□□□□ -1.48
SCN1A-209ENST00000635750 SH2B2O14492 632 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 DYNC1LI2O43237 492 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PDGFRBP09619 1106 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 FAM200BP0CF97 657 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PCNAP12004 261 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CLK3P49761 638 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 NFIAQ12857 509 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MIIPQ5JXC2 388 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ATAD3BQ5T9A4 648 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CAPRIN2Q6IMN6 1127 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 RAD54LQ92698 747 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SLITRK2Q9H156 845 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SEC31BQ9NQW1 1179 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 AHSPQ9NZD4 102 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms