RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 KIAA1257Q9ULG3 409 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 BARX2Q9UMQ3 279 aaPredicted RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 CCDC66A2RUB6 948 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 CEP104O60308 925 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 FKTNO75072 461 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 CD19P15391 556 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 RRM1P23921 792 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 SLC1A1P43005 524 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 PTP4A2Q12974 167 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 PTK7Q13308 1070 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 MESDQ14696 234 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 STILQ15468 1287 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 LONRF2Q1L5Z9 754 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 PLEKHA7Q6IQ23 1121 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 SMG8Q8ND04 991 aaKnown RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 CD101Q93033 1021 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
TP53-228ENST00000635293 TUBGCP4Q9UGJ1 667 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 HES2Q9Y543 173 aa12.38□□□□□ -0.43
TP53-228ENST00000635293 SMIM28A0A1B0GU29 152 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 CCDC188H7C350 402 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 GPR182O15218 404 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 SPOPO43791 374 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 SASH3O75995 380 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 CFHP08603 1231 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 VDRP11473 427 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 COMTP21964 271 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 MAN1A1P33908 653 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
TP53-228ENST00000635293 VEGFBP49765 207 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 TAP1Q03518 808 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 PTGISQ16647 500 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
TP53-228ENST00000635293 TFAP2BQ92481 460 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 TMEM176AQ96HP8 235 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 PNKPQ96T60 521 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 APOL6Q9BWW8 343 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 DNAI2Q9GZS0 605 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
TP53-228ENST00000635293 PARVAQ9NVD7 372 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 EHD2Q9NZN4 543 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 PARP2Q9UGN5 583 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 STRIP2Q9ULQ0 834 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
TP53-228ENST00000635293 TMEM110-MUSTN1A8MSY1 372 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 MAP2K7O14733 419 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 CHRNA1P02708 482 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 HSPA6P17066 643 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 RAB27AP51159 221 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 ACLYP53396 1101 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 GSCP56915 257 aaPredicted RBP12.36□□□□□ -0.43
TP53-228ENST00000635293 ITGA7Q13683 1181 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 FAM26DQ5JW98 314 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 BEND6Q5SZJ8 279 aaPredicted RBP12.36□□□□□ -0.43
TP53-228ENST00000635293 C8orf74Q6P047 294 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 WNT8BQ93098 351 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 PRDM4Q9UKN5 801 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 ST3GAL5Q9UNP4 418 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 MYO1FO00160 1098 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 PIRO00625 290 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 INHAP05111 366 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 CTSHP09668 335 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 AKAP5P24588 427 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 CDH8P55286 799 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 MAMLD1Q13495 774 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 PTPROQ16827 1216 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 SV2CQ496J9 727 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 SGO2Q562F6 1265 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 GLRA4Q5JXX5 417 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 DCAF12L1Q5VU92 463 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 C18orf25Q96B23 403 aaPredicted RBP12.36□□□□□ -0.43
TP53-228ENST00000635293 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
TP53-228ENST00000635293 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 PLVAPQ9BX97 442 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 ERVK-5Q9HDB9 667 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 SLC38A7Q9NVC3 462 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 HMGXB4Q9UGU5 601 aa12.36□□□□□ -0.43
TP53-228ENST00000635293 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
TP53-228ENST00000635293 TDRD15B5MCY1 1934 aaKnown RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 FAM170AA1A519 330 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 PROSCO94903 275 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
TP53-228ENST00000635293 LRPAP1P30533 357 aa12.35□□□□□ -0.43
TP53-228ENST00000635293 THPOP40225 353 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms