RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 GPD1P21695 349 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 CALML6Q8TD86 181 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 SCFD2Q8WU76 684 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 KRT35Q92764 455 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 MXRA8Q9BRK3 442 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 IGSF9BQ9UPX0 1349 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 ALKQ9UM73 1620 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 NDUFB5O43674 189 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 HLA-DRAP01903 254 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 EFHC1Q5JVL4 640 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 FAM118BQ9BPY3 351 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 MAN1C1Q9NR34 630 aa12.27□□□□□ -0.45
SHPRH-211ENST00000629427 PRMT7Q9NVM4 692 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-211ENST00000629427 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SERPINB10P48595 397 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TRPC1P48995 793 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SLC16A1P53985 500 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 ZNF177Q13360 481 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TTC39BQ5VTQ0 682 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PCYOX1LQ8NBM8 494 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 COLEC11Q9BWP8 271 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TRIM9Q9C026 710 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CRLS1Q9UJA2 301 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PRG3Q9Y2Y8 225 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TRPM1Q7Z4N2 1603 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 LRRIQ3A6PVS8 624 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 RHOBTB1O94844 696 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 APOA1P02647 267 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 KRT16P08779 473 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CDH2P19022 906 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 NUMBP49757 651 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 ERAP2Q6P179 960 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CHP1Q99653 195 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 WDR47O94967 919 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PGK2P07205 417 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 GALCP54803 685 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SLC18A3Q16572 532 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 LRRC36Q1X8D7 754 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PRR5LQ6MZQ0 368 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 C10orf53Q8N6V4 93 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 RBM15Q96T37 977 aaKnown RBP eCLIP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 NSMCE4AQ9NXX6 385 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 DPP3Q9NY33 737 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 FOXP2O15409 715 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TRIM60Q495X7 471 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 UGT3A1Q6NUS8 523 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 ANKRD13AQ8IZ07 590 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 ATP6V0D2Q8N8Y2 350 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 FBXO2Q9UK22 296 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 PNMA8BQ9ULN7 279 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 H2AFYO75367 372 aaKnown RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TCN1P20061 433 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 YY1P25490 414 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 TCF7P36402 384 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 NCKAP1LP55160 1127 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 MTM1Q13496 603 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 MTFR1Q15390 333 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 HIST2H2ACQ16777 129 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 HIST2H2AA3Q6FI13 130 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 ADCK1Q86TW2 530 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 FAM167BQ9BTA0 163 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 STN1Q9H668 368 aaKnown RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 KCND2Q9NZV8 630 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 BRD2P25440 801 aaKnown RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SLC11A2P49281 568 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 BTNL9Q6UXG8 535 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 C7orf25Q9BPX7 421 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 SCUBE2Q9NQ36 999 aa12.26□□□□□ -0.45
SHPRH-211ENST00000629427 NFKBIL1Q9UBC1 381 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-211ENST00000629427 LZTS3O60299 673 aaPredicted RBP12.25□□□□□ -0.45
SHPRH-211ENST00000629427 STAG3L1P0CL83 205 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 PTK6Q13882 451 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 VMP1Q96GC9 406 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 USE1Q9NZ43 259 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 PAK5Q9P286 719 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 SLC39A10Q9ULF5 831 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 ABCC3O15438 1527 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 UCHL3P15374 230 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 RFX3P48380 749 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 SERPINB9P50453 376 aa12.25□□□□□ -0.45
SHPRH-211ENST00000629427 ALDH6A1Q02252 535 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms