RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 IFNA14P01570 189 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC2A3P11169 496 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 CHI3L1P36222 383 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 NFRKBQ6P4R8 1299 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 ADGRA2Q96PE1 1338 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 RFWD2Q8NHY2 731 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
SYNGAP1-208ENST00000629380 PRIM2P49643 509 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 TRIM63Q969Q1 353 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 FHDC1Q9C0D6 1143 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 DTNBO60941 627 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SRGAP2O75044 1071 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 POLBP06746 335 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 RXRGP48443 463 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 COG2Q14746 738 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 NCAPHQ15003 741 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 APRTP07741 180 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 MRPS35P82673 323 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 ADRM1Q16186 407 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 FLCNQ8NFG4 579 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYFIP2Q96F07 1278 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 MED14O60244 1454 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 STRNO43815 780 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 LCP1P13796 627 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 GPR141Q7Z602 305 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 C19orf18Q8NEA5 215 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CLMNQ96JQ2 1002 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 PSMC5P62195 406 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC44A4Q53GD3 710 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 RMND5BQ96G75 393 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CTNNAL1Q9UBT7 734 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 TRIM24O15164 1050 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 POU4F1Q01851 419 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SHCBP1Q8NEM2 672 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 DRAP1Q14919 205 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 PIGUQ9H490 435 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 MLXIPLQ9NP71 852 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 FTLP02792 175 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 TRIM49P0CI25 452 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 TRIM49CP0CI26 452 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 CCT8P50990 548 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 GSTA3Q16772 222 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 P3H2Q8IVL5 708 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 SIK2Q9H0K1 926 aa13.75□□□□□ -0.21
SYNGAP1-208ENST00000629380 MMRN1Q13201 1228 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 MICU2Q8IYU8 434 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 SH3GL1Q99961 368 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 RMND5AQ9H871 391 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 EXOSC4Q9NPD3 245 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PEX1O43933 1283 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 TERF2Q15554 542 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 SFR1Q86XK3 245 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 SPRTNQ9H040 489 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PHF2O75151 1096 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 FYNP06241 537 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 TAB1Q15750 504 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 RNPC3Q96LT9 517 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 MROH7-TTC4A0A0A0MT08 1334 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP27B1O15528 508 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 CYP51A1Q16850 503 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PRRG1O14668 218 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 F5H423 210 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 USP1O94782 785 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PTRHD1Q6GMV3 140 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 AGR3Q8TD06 166 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PPP1R14AQ96A00 147 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 KLHL11Q9NVR0 708 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PCSK1NQ9UHG2 260 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 ACADSBP45954 432 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 OLFML2BQ68BL8 750 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 ARHGAP15Q53QZ3 475 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 GALNT8Q9NY28 637 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 SLC25A13Q9UJS0 675 aa13.74□□□□□ -0.21
SYNGAP1-208ENST00000629380 ECDO95905 644 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms