RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 H7C4K7 107 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 CYB561D2O14569 222 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 GABRDO14764 452 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 HCRTO43612 131 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 EXOC3O60645 756 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 KINO60870 393 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 CST3P01034 146 aaPredicted RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 DLATP10515 647 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 ODC1P11926 461 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 MTHFRP42898 656 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 SURF1Q15526 300 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 CCDC142Q17RM4 750 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 DUOXA2Q1HG44 320 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 EDRF1Q3B7T1 1238 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 SV2CQ496J9 727 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 TPGS2Q68CL5 300 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 OVOS1Q6IE37 1185 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 CYP26C1Q6V0L0 522 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 LRRTM3Q86VH5 581 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 PDCL2Q8N4E4 241 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 CSGALNACT2Q8N6G5 542 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 SLC7A14Q8TBB6 771 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 CCDC127Q96BQ5 260 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 ZNF560Q96MR9 790 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 MED15Q96RN5 788 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 WDR6Q9NNW5 1121 aaKnown RBP11.96□□□□□ -0.49
DDX41-219ENST00000629036 RMND1Q9NWS8 449 aa11.96□□□□□ -0.49
DDX41-219ENST00000629036 MTMR11A4FU01 709 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 TRIM49BA6NDI0 452 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 OR6C75A6NL08 312 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 HNRNPA1P09651 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
DDX41-219ENST00000629036 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 NR2F2P24468 414 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 PNPLA4P41247 253 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 VCPP55072 806 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 NTHL1P78549 312 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 RBP5P82980 135 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 ENPEPQ07075 957 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 GPR17Q13304 367 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 ZACNQ401N2 412 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 DSTYKQ6XUX3 929 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 RTL10Q7L3V2 364 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 BMP8AQ7Z5Y6 402 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 FBXL6Q8N531 539 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 CACTINQ8WUQ7 758 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 SMG7Q92540 1137 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 SMARCE1Q969G3 411 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 ANKRD36BP1Q96IX9 119 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 VRTNQ9H8Y1 702 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 HCFC1R1Q9NWW0 138 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 AFF4Q9UHB7 1163 aaKnown RBP11.95□□□□□ -0.5
DDX41-219ENST00000629036 INSL5Q9Y5Q6 135 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 MYO16Q9Y6X6 1858 aa11.95□□□□□ -0.5
DDX41-219ENST00000629036 H0Y858 1186 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 CCL16O15467 120 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 CALUO43852 315 aaPredicted RBP11.94□□□□□ -0.5
DDX41-219ENST00000629036 SMC2O95347 1197 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 PPP3CAQ08209 521 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 BFSP1Q12934 665 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 SLC5A9Q2M3M2 681 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 UVSSAQ2YD98 709 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 ANKRD40Q6AI12 368 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 FOXR2Q6PJQ5 311 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 TOP6BLQ8N6T0 577 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 HPDLQ96IR7 371 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 MYADMQ96S97 322 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 OXCT2Q9BYC2 517 aaPredicted RBP11.94□□□□□ -0.5
DDX41-219ENST00000629036 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
DDX41-219ENST00000629036 DSEQ9UL01 958 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 USTQ9Y2C2 406 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 YIPF1Q9Y548 306 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 CACNA1BQ00975 2339 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 COL4A3Q01955 1670 aa11.94□□□□□ -0.5
DDX41-219ENST00000629036 LRRN2O75325 713 aa11.93□□□□□ -0.5
DDX41-219ENST00000629036 MOSPD3O75425 235 aa11.93□□□□□ -0.5
DDX41-219ENST00000629036 KIF20AO95235 890 aa11.93□□□□□ -0.5
DDX41-219ENST00000629036 TNNC2P02585 160 aa11.93□□□□□ -0.5
DDX41-219ENST00000629036 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
DDX41-219ENST00000629036 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms