RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 MMGT1Q8N4V1 131 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TMEM35BQ8NCS4 154 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 ACTRT1Q8TDG2 376 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TFAP2BQ92481 460 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 C18orf25Q96B23 403 aaPredicted RBP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TMEM176AQ96HP8 235 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 ZNF560Q96MR9 790 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 NUP85Q9BW27 656 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 ELOVL4Q9GZR5 314 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 PDCL3Q9H2J4 239 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TRMT13Q9NUP7 481 aaKnown RBP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
RAB5B-211ENST00000628569 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
RAB5B-211ENST00000628569 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 PTGESO14684 152 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 PPEF2O14830 753 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CALB1P05937 261 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 VDRP11473 427 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CTNNA2P26232 953 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 PAK2Q13177 524 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 STILQ15468 1287 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CNGA2Q16280 664 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 TEX35Q5T0J7 233 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 LIN9Q5TKA1 542 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 UNC93AQ86WB7 457 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 WDTC1Q8N5D0 677 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CPA5Q8WXQ8 436 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CD101Q93033 1021 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CAPZA3Q96KX2 299 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 APOL6Q9BWW8 343 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 CARD9Q9H257 536 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 MRPL47Q9HD33 250 aaKnown RBP13.77□□□□□ -0.21
RAB5B-211ENST00000628569 PAK6Q9NQU5 681 aaPredicted RBP13.77□□□□□ -0.21
RAB5B-211ENST00000628569 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 LCMT1Q9UIC8 334 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.21
RAB5B-211ENST00000628569 TRIM17Q9Y577 477 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 ALG6Q9Y672 507 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 SCINQ9Y6U3 715 aa13.77□□□□□ -0.21
RAB5B-211ENST00000628569 ARVCFO00192 962 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 O00370 1275 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 DNM1LO00429 736 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 INPPL1O15357 1258 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 TUBBP07437 444 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 ITGA4P13612 1032 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 ZSCAN20P17040 1043 aaPredicted RBP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 RRM1P23921 792 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 CD52P31358 61 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 CDK7P50613 346 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 SV2CQ496J9 727 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 ZNF394Q53GI3 561 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 GLRA4Q5JXX5 417 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 PASD1Q8IV76 773 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 GSTCDQ8NEC7 633 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 SELENOOQ9BVL4 669 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 NT5C1AQ9BXI3 368 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 STARD7Q9NQZ5 370 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 HMGXB4Q9UGU5 601 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 TMEM59LQ9UK28 342 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAB5B-211ENST00000628569 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 PTPN22Q9Y2R2 807 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 CEP83Q9Y592 693 aa13.76□□□□□ -0.21
RAB5B-211ENST00000628569 A0A0U1RQF3 1178 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 TARSL2A2RTX5 802 aaKnown RBP13.75□□□□□ -0.21
RAB5B-211ENST00000628569 KBTBD13C9JR72 458 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 KCNK3O14649 394 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
RAB5B-211ENST00000628569 CKBP12277 381 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 SKIP12755 728 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 CXCR5P32302 372 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 MAN1A1P33908 653 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 CTNNA1P35221 906 aaKnown RBP13.75□□□□□ -0.21
RAB5B-211ENST00000628569 SLC1A1P43005 524 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 TAF6P49848 677 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 NDST1P52848 882 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 CLUL1Q15846 466 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 ZNF618Q5T7W0 954 aa13.75□□□□□ -0.21
RAB5B-211ENST00000628569 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms