RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 KYAT1Q16773 422 aa21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 ZC3H3Q8IXZ2 948 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 ZNF461Q8TAF7 563 aa21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 NOC3LQ8WTT2 800 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 FAM86C1Q9NVL1 165 aa21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 CPSF3Q9UKF6 684 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 NUMBLQ9Y6R0 609 aa21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 FAM186AA6NE01 2351 aa21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 RIF1Q5UIP0 2472 aaKnown RBP21.52■■□□□ 1.04
R3HCC1-210ENST00000625275 ZFHX2Q9C0A1 2572 aaPredicted RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 WDR27A2RRH5 827 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 H0Y858 1186 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 TBC1D4O60343 1298 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 EXOC3O60645 756 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 LDHAP00338 332 aaKnown RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 RPL13P26373 211 aaKnown RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 CASP4P49662 377 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 FKBP3Q00688 224 aaKnown RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 PPP2R3AQ06190 1150 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 ADAM9Q13443 819 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 PABPC1LQ4VXU2 614 aaKnown RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 CBWD2Q8IUF1 395 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 ATOH1Q92858 354 aaPredicted RBP21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 FGF13Q92913 245 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 HCFC1R1Q9NWW0 138 aa21.52■■□□□ 1.03
R3HCC1-210ENST00000625275 ABLIM3O94929 683 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 ZNF445P59923 1031 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 SPAG1Q07617 926 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 MRPL58Q14197 206 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 ENOX2Q16206 610 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 SNRNP35Q16560 246 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 ZNF280DQ6N043 979 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 LRSAM1Q6UWE0 723 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 CSGALNACT2Q8N6G5 542 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 ITFG1Q8TB96 612 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 KIF12Q96FN5 646 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 NAT10Q9H0A0 1025 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 DNMT3BQ9UBC3 853 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 FBXL5Q9UKA1 691 aa21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 UBQLN1Q9UMX0 589 aaKnown RBP21.51■■□□□ 1.03
R3HCC1-210ENST00000625275 FANCMQ8IYD8 2048 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 ARHGEF37A1IGU5 675 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 KRBA1A5PL33 1030 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 PRRG1O14668 218 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 AKAP3O75969 853 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 ADRB2P07550 413 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 LRPAP1P30533 357 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 ELF1P32519 619 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 ARPP19P56211 112 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 CTXN3Q4LDR2 81 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 CEP135Q66GS9 1140 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 MTSS1LQ765P7 747 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 RDH13Q8NBN7 331 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 APPL2Q8NEU8 664 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 ST13P5Q8NFI4 369 aaPredicted RBP21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 GPR152Q8TDT2 470 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 FGF14Q92915 247 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 RTP3Q9BQQ7 232 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 KIAA1586Q9HCI6 787 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 SLC2A4RGQ9NR83 387 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 CA14Q9ULX7 337 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 PCDHB8Q9UN66 801 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 CACNA1IQ9P0X4 2223 aa21.5■■□□□ 1.03
R3HCC1-210ENST00000625275 CETN3O15182 167 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 XPOTO43592 962 aaKnown RBP21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 LRG1P02750 347 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 ATF2P15336 505 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 CYP3A5P20815 502 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 ZBTB6Q15916 424 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 PARM1Q6UWI2 310 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 NPAS3Q8IXF0 933 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 ENOX1Q8TC92 643 aaKnown RBP21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 RPF1Q9H9Y2 349 aaKnown RBP21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 RBAKQ9NYW8 714 aaPredicted RBP21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 FRMD4BQ9Y2L6 1034 aa21.49■■□□□ 1.03
R3HCC1-210ENST00000625275 PATJQ8NI35 1801 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 ZNF233A6NK53 670 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 LACTBL1A8MY62 500 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 PI15O43692 258 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 ZNF165P49910 485 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 TPGS2Q68CL5 300 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 BRSK2Q8IWQ3 736 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 TCEAL8Q8IYN2 117 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 CEP63Q96MT8 703 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 TSPAN18Q96SJ8 248 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 BPIFA3Q9BQP9 254 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 SRRTQ9BXP5 876 aaKnown RBP21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 MRPS23Q9Y3D9 190 aaKnown RBP21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 INSL5Q9Y5Q6 135 aa21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 PTPRZ1P23471 2315 aaPredicted RBP21.48■■□□□ 1.03
R3HCC1-210ENST00000625275 M0QZQ0 153 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 RHOP08100 348 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 RFX1P22670 979 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 WNT7BP56706 349 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 POU5F1Q01860 360 aaKnown RBP21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 SPATA1Q5VX52 437 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 CCDC105Q8IYK2 499 aa21.47■■□□□ 1.03
R3HCC1-210ENST00000625275 ING5Q8WYH8 240 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms