RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PLEKHA5Q9HAU0 1116 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 AIPL1Q9NZN9 384 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 BCL9O00512 1426 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 CTSHP09668 335 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
GABRB3-215ENST00000622697 TISP43B9A030 160 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 SLITRK3O94933 977 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 ZBTB41Q5SVQ8 909 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 FRA10AC1Q70Z53 315 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 ZNF560Q96MR9 790 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 MANSC1Q9H8J5 431 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 SP110Q9HB58 689 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 ORC6Q9Y5N6 252 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 LOC102724159A0A0B4J2E5 919 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 SNX2O60749 519 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 GPD1P21695 349 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 RFC5P40937 340 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 CASP5P51878 434 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 PWP2Q15269 919 aaKnown RBP16.92■□□□□ 0.3
GABRB3-215ENST00000622697 HPDLQ96IR7 371 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 TMEM121Q9BTD3 319 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 SHCBP1LQ9BZQ2 653 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 TSPYL2Q9H2G4 693 aaPredicted RBP16.92■□□□□ 0.3
GABRB3-215ENST00000622697 L3MBTL1Q9Y468 752 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 RIC1Q4ADV7 1423 aa16.92■□□□□ 0.3
GABRB3-215ENST00000622697 DDX3XO00571 662 aaKnown RBP eCLIP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RAP1GAPP47736 663 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 ZNF507Q8TCN5 953 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 CAVIN3Q969G5 261 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 XAB2Q9HCS7 855 aaKnown RBP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 FAM237AA0A1B0GTK4 181 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 EFTUD2Q15029 972 aaKnown RBP eCLIP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 BTBD8Q5XKL5 378 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 CYB5D1Q6P9G0 228 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 PPIL6Q8IXY8 311 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 FAM111AQ96PZ2 611 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 LRRC10BA6NIK2 292 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 MEA1Q16626 185 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 GLRA4Q5JXX5 417 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 SV2AQ7L0J3 742 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 NCLNQ969V3 563 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 LOC100653049A0A140TA62 436 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 B2RBV5 119 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 KRT34O76011 436 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 GEMIN4P57678 1058 aaKnown RBP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 COBLL1Q53SF7 1204 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 DDIASQ8IXT1 998 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 DRC3Q9H069 523 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RSAD1Q9HA92 442 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 KCNMA1Q12791 1236 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 PRPF31Q8WWY3 499 aaKnown RBP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
GABRB3-215ENST00000622697 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
GABRB3-215ENST00000622697 RNF103-CHMP3A0A140T963 221 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 MAFGO15525 162 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 CSDE1O75534 798 aaKnown RBP16.9■□□□□ 0.3
GABRB3-215ENST00000622697 STYK1Q6J9G0 422 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 ANGPTL8Q6UXH0 198 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 HAUS8Q9BT25 410 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 AADACL2Q6P093 401 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 KCNV1Q6PIU1 500 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
GABRB3-215ENST00000622697 ICA1LQ8NDH6 482 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 GPATCH2LQ9NWQ4 482 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 PHTF1Q9UMS5 762 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 SIK3Q9Y2K2 1263 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 TRIM49D1C9J1S8 452 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 KLRC4O43908 158 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 RARGP13631 454 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 SOX11P35716 441 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 CHI3L2Q15782 390 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 EMC1Q8N766 993 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 GMCL1P1Q8NEA9 526 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 NOD2Q9HC29 1040 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 PAK5Q9P286 719 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 PPME1Q9Y570 386 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
GABRB3-215ENST00000622697 C2orf69Q8N8R5 385 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 SNRPAP09012 282 aaKnown RBP16.9■□□□□ 0.3
GABRB3-215ENST00000622697 SCTRP47872 440 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 CBWD6Q4V339 395 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 CBWD3Q5JTY5 395 aa16.9■□□□□ 0.3
GABRB3-215ENST00000622697 CBWD5Q5RIA9 395 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms