RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CSDE1O75534 798 aaKnown RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 CPP00450 1065 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 IFNAR2P48551 515 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 ZNF699Q32M78 642 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 PRRT2Q7Z6L0 340 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 SULF1Q8IWU6 871 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 ROPN1BQ9BZX4 212 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 XYLT2Q9H1B5 865 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 MINDY3Q9H8M7 445 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 ROPN1Q9HAT0 212 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 DNPEPQ9ULA0 475 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 CAPN7Q9Y6W3 813 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 ASPAP45381 313 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 CLCN3P51790 818 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 GRM1Q13255 1194 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 IZUMO3Q5VZ72 239 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 FBXW10Q5XX13 1052 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 CACNA2D3Q8IZS8 1091 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 CCDC89Q8N998 374 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 TMEM35BQ8NCS4 154 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 DCPSQ96C86 337 aaKnown RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 SLITRK1Q96PX8 696 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
TP53-227ENST00000622645 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 TJP2Q9UDY2 1190 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 POLIQ9UNA4 740 aa12.67□□□□□ -0.38
TP53-227ENST00000622645 KRT1P04264 644 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 CALB1P05937 261 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 KRT19P08727 400 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 ORC1Q13415 861 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 MPZL3Q6UWV2 235 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
TP53-227ENST00000622645 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 NINJ2Q9NZG7 142 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 LGR5O75473 907 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 LSM8O95777 96 aaKnown RBP12.66□□□□□ -0.38
TP53-227ENST00000622645 CXCL8P10145 99 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 ETS1P14921 441 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PROZP22891 400 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 KLRC2P26717 231 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 CDH8P55286 799 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 CAV1Q03135 178 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 LRRC14Q15048 493 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 P3H1Q32P28 736 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PLPPR4Q7Z2D5 763 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
TP53-227ENST00000622645 ZNF148Q9UQR1 794 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 PTPRFP10586 1907 aa12.66□□□□□ -0.38
TP53-227ENST00000622645 GOLGA8SH3BPF8 625 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 ACKR2O00590 384 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 LIASO43766 372 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 ITGBL1O95965 494 aaPredicted RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 CD19P15391 556 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 PSMC4P43686 418 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 CNGA2Q16280 664 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 TAOK1Q7L7X3 1001 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 LRRC34Q8IZ02 419 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 MGARPQ8TDB4 240 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 C2orf40Q9H1Z8 148 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 FZD8Q9H461 694 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 RNPEPQ9H4A4 650 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 TBK1Q9UHD2 729 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 LRRD1A4D1F6 860 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 CETPP11597 493 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 EIF4BP23588 611 aaKnown RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 CETN2P41208 172 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 IGBP1P78318 339 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
TP53-227ENST00000622645 KCTD2Q14681 263 aa12.65□□□□□ -0.38
TP53-227ENST00000622645 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms