RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SLC29A2Q14542 456 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 LLGL1Q15334 1064 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 SLC47A2Q86VL8 602 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 TREML1Q86YW5 311 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 ELMO3Q96BJ8 720 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 MPP4Q96JB8 637 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 TMEM117Q9H0C3 514 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 SEMA4AQ9H3S1 761 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 CNOT10Q9H9A5 744 aaKnown RBP13.14□□□□□ -0.31
LITAF-221ENST00000622633 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 TTLL3Q9Y4R7 772 aa13.14□□□□□ -0.31
LITAF-221ENST00000622633 PFASO15067 1338 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 H0Y3Z8 333 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SLC16A4O15374 487 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 SNX3O60493 162 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 COL6A2P12110 1019 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 PLS3P13797 630 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CCNB1P14635 433 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CHRNA3P32297 505 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 RARRES1P49788 294 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 DRG2P55039 364 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 ZC3H18Q86VM9 953 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 IRF2BPLQ9H1B7 796 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 NOCTQ9UK39 431 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 NFIBO00712 420 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 ADRB2P07550 413 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 NUDT17P0C025 328 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CTNNA2P26232 953 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SERPINB3P29508 390 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 KCNJ1P48048 391 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 MXI1P50539 228 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 PEX3P56589 373 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 IFI35P80217 286 aaPredicted RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 CLUL1Q15846 466 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 SPDYCQ5MJ68 293 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CCDC137Q6PK04 289 aaKnown RBP13.13□□□□□ -0.31
LITAF-221ENST00000622633 FAM71AQ8IYT1 594 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CCDC127Q96BQ5 260 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SELENOSQ9BQE4 189 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 ATAD3AQ9NVI7 634 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 FAIMQ9NVQ4 179 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
LITAF-221ENST00000622633 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
LITAF-221ENST00000622633 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 LYNP07948 512 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 ZCCHC18P0CG32 403 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 CHN1P15882 459 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 SPP2Q13103 211 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 FAM160B2Q86V87 743 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 POP1Q99575 1024 aaKnown RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 CGREF1Q99674 301 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 FADS3Q9Y5Q0 445 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 MYH11P35749 1972 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 SPOPO43791 374 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 UBTFL6P0CB48 400 aaPredicted RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 HSPA6P17066 643 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 FGFR4P22455 802 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 VHLP40337 213 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 QARSP47897 775 aaKnown RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 OCRLQ01968 901 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 SEL1L2Q5TEA6 688 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 RIBC1Q8N443 379 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms