RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 HARSP12081 509 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 TCF4P15884 667 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 GSCP56915 257 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 OGDHQ02218 1023 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 PIGHQ14442 188 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 ITIH4Q14624 930 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 TRIP13Q15645 432 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 POLNQ7Z5Q5 900 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 NFKBIZQ9BYH8 718 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 LHX5Q9H2C1 402 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 SRCAPQ6ZRS2 3230 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 BRD2P25440 801 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 CETN2P41208 172 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 PPARDQ03181 441 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 PRKG1Q13976 671 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 KYNUQ16719 465 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 EAPPQ56P03 285 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 IZUMO3Q5VZ72 239 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 GPAT2Q6NUI2 795 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CCDC62Q6P9F0 684 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 TAX1BP1Q86VP1 789 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 ALLCQ8N6M5 410 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 TFAP2BQ92481 460 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CCT6BQ92526 530 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 MPHOSPH6Q99547 160 aaKnown RBP9.98□□□□□ -0.81
PDPN-212ENST00000621990 KDM4CQ9H3R0 1056 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 EFCC1Q9HA90 598 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 USTQ9Y2C2 406 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 EFR3BQ9Y2G0 817 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 CSADQ9Y600 493 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
PDPN-212ENST00000621990 LOC102724159A0A0B4J2E5 919 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 F8VP50 259 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 GHRP10912 638 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 CDKN2BP42772 138 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 PWP2Q15269 919 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 ZNF699Q32M78 642 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ANKRD20A8PQ5CZ79 823 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 VSTM1Q6UX27 236 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 MFSD7Q6UXD7 560 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 SPOCD1Q6ZMY3 1216 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 CCDC121Q6ZUS5 278 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 CCDC13Q8IYE1 715 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ARHGEF2Q92974 986 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 PRMT1Q99873 361 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 TCHPQ9BT92 498 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 BCO2Q9BYV7 579 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 R3HDMLQ9H3Y0 253 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 DDX56Q9NY93 547 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 STRIP2Q9ULQ0 834 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ACTL7BQ9Y614 415 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 CAPN7Q9Y6W3 813 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 hCG_1818297A0A087WSY0 165 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 C3orf70A6NLC5 250 aaPredicted RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 CXCL11O14625 94 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ITGAVP06756 1048 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 YWHAEP62258 255 aaKnown RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 MBTD1Q05BQ5 628 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 TAZQ16635 292 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 ATP13A4Q4VNC1 1196 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 TFDP3Q5H9I0 405 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 RNF187Q5TA31 235 aaPredicted RBP9.97□□□□□ -0.81
PDPN-212ENST00000621990 ATF7IP2Q5U623 682 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 TRIM50Q86XT4 487 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 FNIP1Q8TF40 1166 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 DNPEPQ9ULA0 475 aa9.97□□□□□ -0.81
PDPN-212ENST00000621990 DNALI1O14645 258 aaPredicted RBP9.96□□□□□ -0.81
PDPN-212ENST00000621990 CDH16O75309 829 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 IL18RAPO95256 599 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.81
PDPN-212ENST00000621990 KRT1P04264 644 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 KRT10P13645 584 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 MARK3P27448 753 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.81
PDPN-212ENST00000621990 POU5F1BQ06416 359 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 TRPC3Q13507 836 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 TFDP1Q14186 410 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 STAT4Q14765 748 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 P3H1Q32P28 736 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 SUGP1Q8IWZ8 645 aaKnown RBP9.96□□□□□ -0.81
PDPN-212ENST00000621990 LRRC34Q8IZ02 419 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 CCDC197Q8NCU1 140 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 CXorf38Q8TB03 319 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 PWWP2AQ96N64 755 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 FAM118BQ9BPY3 351 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.81
PDPN-212ENST00000621990 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms