RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 AMHR2Q16671 573 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 IMMTQ16891 758 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 XKR4Q5GH76 650 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 GPR158Q5T848 1215 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ARHGAP40Q5TG30 622 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 EMC10Q5UCC4 262 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CENPPQ6IPU0 288 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 IGF2-ASQ6U949 168 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DHRS13Q6UX07 377 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 B3GNT9Q6UX72 402 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 NUDT18Q6ZVK8 323 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ANO5Q75V66 913 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TRMT1LQ7Z2T5 733 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ITIH5Q86UX2 942 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 FERMT3Q86UX7 667 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 MON1AQ86VX9 555 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 MARCH9Q86YJ5 346 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 KSR1Q8IVT5 923 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DHX40Q8IX18 779 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ADGRG2Q8IZP9 1017 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CPA6Q8N4T0 437 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 FRMD1Q8N878 549 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TRIML1Q8N9V2 468 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 IL17RCQ8NAC3 791 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 APPL2Q8NEU8 664 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 OR2I1PQ8NGU4 316 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 CTCFLQ8NI51 663 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 C1orf216Q8TAB5 229 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 IGDCC4Q8TDY8 1250 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 OSCP1Q8WVF1 389 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TCP11Q8WWU5 503 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PSPC1Q8WXF1 523 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RFFLQ8WZ73 363 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 RABGGTAQ92696 567 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 GRAMD1AQ96CP6 724 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PRIMPOLQ96LW4 560 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 NLRP4Q96MN2 994 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 LGMNQ99538 433 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DSCC1Q9BVC3 393 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 TRIM6Q9C030 488 aaPredicted RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 BCL11AQ9H165 835 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 EBF3Q9H4W6 596 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DHX33Q9H6R0 707 aaKnown RBP2.62□□□□□ -1.99
CPNE3-211ENST00000621526 GAREM1Q9H706 876 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 FSCN3Q9NQT6 498 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PARP2Q9UGN5 583 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 FBXL5Q9UKA1 691 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 DDX19BQ9UMR2 479 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 HES2Q9Y543 173 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PATJQ8NI35 1801 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 NEDD4P46934 1319 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 PHLPP2Q6ZVD8 1323 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 ZFHX3Q15911 3703 aa2.62□□□□□ -1.99
CPNE3-211ENST00000621526 NID2Q14112 1375 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ABCA2Q9BZC7 2435 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 LAMA4Q16363 1823 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 IGHV1OR15-9A0A0B4J2B8 117 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1B0GTL3 188 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ANO9A1A5B4 782 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SMCO2A6NFE2 343 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CASTOR2A6NHX0 329 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 OR6C75A6NL08 312 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 METTL12A8MUP2 240 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 hCG_1984214I3L0E3 225 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SGK1O00141 431 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DDX39AO00148 427 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 IFIT3O14879 490 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 BCAT2O15382 392 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 KLK10O43240 276 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SMARCA5O60264 1052 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MARCH6O60337 910 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 BRINP1O60477 761 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DDAH1O94760 285 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 F11P03951 625 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CALM1P0DP23 149 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CALM2P0DP24 149 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CALM3P0DP25 149 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MYF5P13349 255 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 HNRNPLP14866 589 aaKnown RBP eCLIP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 GABRR2P28476 465 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 TKTP29401 623 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MARCKSP29966 332 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 GRIA2P42262 883 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 KIR2DL1P43626 348 aaPredicted RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 LSSP48449 732 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 CLCNKBP51801 687 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF132P52740 706 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 PSMC5P62195 406 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SKOR1P84550 965 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 FOXK1P85037 733 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 TLE1Q04724 770 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SMARCB1Q12824 385 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 BFSP1Q12934 665 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 GRIK2Q13002 908 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 DUSP4Q13115 394 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 TFDP1Q14186 410 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 MYBPC2Q14324 1141 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 SF3A1Q15459 793 aaKnown RBP2.61□□□□□ -1.99
CPNE3-211ENST00000621526 UBE2SQ16763 222 aa2.61□□□□□ -1.99
CPNE3-211ENST00000621526 FAM187BQ17R55 369 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms