RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZCCHC7Q8N3Z6 543 aaKnown RBP5.27□□□□□ -1.57
VPS13D-214ENST00000620676 ALKBH8Q96BT7 664 aaKnown RBP5.27□□□□□ -1.57
VPS13D-214ENST00000620676 TAMM41Q96BW9 452 aa5.27□□□□□ -1.57
VPS13D-214ENST00000620676 KLHL20Q9Y2M5 609 aa5.27□□□□□ -1.57
VPS13D-214ENST00000620676 POTEB3A0JP26 581 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DNAL1Q4LDG9 190 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 KLHDC7AQ5VTJ3 777 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 POTEBQ6S5H4 581 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SRBD1Q8N5C6 995 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 RUBCNQ92622 972 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 UCKL1Q9NWZ5 548 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZMYND8Q9ULU4 1186 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SH3TC1Q8TE82 1336 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PDGFRBP09619 1106 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 VCLP18206 1134 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 UBE2J2Q8N2K1 259 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TMEM117Q9H0C3 514 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 THAP2Q9H0W7 228 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 CDC42EP4Q9H3Q1 356 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PRDM11Q9NQV5 511 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 CACNA2D2Q9NY47 1150 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 KRT37O76014 449 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PRKG1Q13976 671 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DHX34Q14147 1143 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.26□□□□□ -1.572e-6■■■■■ 34.8
VPS13D-214ENST00000620676 CDKL2Q92772 493 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 WDR6Q9NNW5 1121 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 CAPN8A6NHC0 703 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TP73O15350 636 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF37AP17032 561 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MAGEA10P43363 369 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DGKHQ86XP1 1220 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C17orf80Q9BSJ5 609 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PHF8Q9UPP1 1060 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ALG6Q9Y672 507 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TLR3O15455 904 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 P4HBP07237 508 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C11orf63Q6NUN7 778 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SEPT12Q8IYM1 358 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 GALNT15Q8N3T1 639 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ASAP3Q8TDY4 903 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 AGPAT1Q99943 283 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 WWP1Q9H0M0 922 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MYRFQ9Y2G1 1151 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TMCO1Q9UM00 188 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SYNDIG1LA6NDD5 238 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 POTECB2RU33 542 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TFECO14948 347 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ALDH4A1P30038 563 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 IL12RB1P42701 662 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 NT5C2P49902 561 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MAPK7Q13164 816 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SMTNL2Q2TAL5 461 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TTI2Q6NXR4 508 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 KLHL17Q6TDP4 642 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C16orf89Q6UX73 402 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DENND5BQ6ZUT9 1274 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 OGDHLQ9ULD0 1010 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PSTPIP1O43586 416 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MGRN1O60291 552 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 GUCY1B2O75343 617 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 RPL5P46777 297 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TRMT5Q32P41 509 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SH3RF1Q7Z6J0 888 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TTC7BQ86TV6 843 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 CATSPER1Q8NEC5 780 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 BHLHE22Q8NFJ8 381 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TINF2Q9BSI4 451 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C17orf75Q9HAS0 396 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 BABAM1Q9NWV8 329 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 WDR64B1ANS9 1081 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 USP11P51784 963 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 NLRP11P59045 1033 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 INPP5AQ14642 412 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MAGEC3Q8TD91 643 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TRPC7Q9HCX4 862 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PLA2G4CQ9UP65 541 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DNAJC16Q9Y2G8 782 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 RALAP11233 206 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ARPC4P59998 168 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MTFR1Q15390 333 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 FASTKD5Q7L8L6 764 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 HACE1Q8IYU2 909 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 L3MBTL3Q96JM7 780 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C12orf4Q9NQ89 552 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA7Q9P0W8 599 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZC3H7BQ9UGR2 993 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 BMP10O95393 424 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MYCLP1P12525 358 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 EIF3EP60228 445 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 CRELD2Q6UXH1 353 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 UXS1Q8NBZ7 420 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA18Q8TC71 538 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ATP6V1E2Q96A05 226 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 LRRC39Q96DD0 335 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZFRQ96KR1 1074 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 PSMB9P28065 219 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms