RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 CPSF3Q9UKF6 684 aaKnown RBP9.49□□□□□ -0.89
TARDBP-222ENST00000620505 MAFFQ9ULX9 164 aa9.49□□□□□ -0.89
TARDBP-222ENST00000620505 USP18Q9UMW8 372 aa9.49□□□□□ -0.89
TARDBP-222ENST00000620505 PTPRZ1P23471 2315 aaPredicted RBP9.49□□□□□ -0.89
TARDBP-222ENST00000620505 COL4A2P08572 1712 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 A0A0B4J269 797 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 CHURC1-FNTBB4DL54 471 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 DPYSL4O14531 572 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 CYB561D2O14569 222 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 PIGRP01833 764 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 CHRNB1P11230 501 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 TYMPP19971 482 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 FNTBP49356 437 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 SPEM2Q0P670 501 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 SRSF5Q13243 272 aaKnown RBP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 PUM1Q14671 1186 aaKnown RBP eCLIP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 SF3A1Q15459 793 aaKnown RBP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 WDR44Q5JSH3 913 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 C9orf57Q5W0N0 161 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 HEATR6Q6AI08 1181 aaKnown RBP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 Q6ZS52 159 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 USP49Q70CQ1 688 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 GAREM2Q75VX8 874 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 STKLD1Q8NE28 680 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 NELL1Q92832 810 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 SECISBP2LQ93073 1101 aaKnown RBP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 FAM84AQ96KN4 292 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 AK8Q96MA6 479 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 PYM1Q9BRP8 204 aaKnown RBP9.48□□□□□ -0.89
TARDBP-222ENST00000620505 MKNK1Q9BUB5 465 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 TRPV4Q9HBA0 871 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 GTSE1Q9NYZ3 720 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 TBC1D7Q9P0N9 293 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 MYH11P35749 1972 aa9.48□□□□□ -0.89
TARDBP-222ENST00000620505 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 VPS37CA5D8V6 355 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ARNTLO00327 626 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 PIRO00625 290 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CHADO15335 359 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 TDGF1P13385 188 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ATF6P18850 670 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CXCL12P48061 93 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CCR3P51677 355 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ZNF131P52739 623 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 GTF2BQ00403 316 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 TNK2Q07912 1038 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 MYBPC2Q14324 1141 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 PON2Q15165 354 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 TAF12Q16514 161 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 KYAT1Q16773 422 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 WSCD1Q658N2 575 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 TXNDC11Q6PKC3 985 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 LRRTM3Q86VH5 581 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 METTL23Q86XA0 190 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 SFR1Q86XK3 245 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CD302Q8IX05 232 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ZSWIM2Q8NEG5 633 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 NOC3LQ8WTT2 800 aaKnown RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 LARP4BQ92615 738 aaKnown RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 PSMG2Q969U7 264 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 EPSTI1Q96J88 318 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 FIZ1Q96SL8 496 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 OXCT2Q9BYC2 517 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 PARD6AQ9NPB6 346 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 TRPV5Q9NQA5 729 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 C2orf42Q9NWW7 574 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 DPP3Q9NY33 737 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 DLL3Q9NYJ7 618 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 GMEB2Q9UKD1 530 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-222ENST00000620505 CLIC4Q9Y696 253 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 FANCMQ8IYD8 2048 aa9.47□□□□□ -0.89
TARDBP-222ENST00000620505 FAM186AA6NE01 2351 aa9.46□□□□□ -0.89
TARDBP-222ENST00000620505 ANO9A1A5B4 782 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 SPECC1L-ADORA2AF8WAN1 911 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 ADRB2P07550 413 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 LONP1P36776 959 aaKnown RBP9.46□□□□□ -0.9
TARDBP-222ENST00000620505 GPR15P49685 360 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 TAF6P49848 677 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 ATXN1P54253 815 aaKnown RBP9.46□□□□□ -0.9
TARDBP-222ENST00000620505 WNT7BP56706 349 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 CEBPZQ03701 1054 aaKnown RBP9.46□□□□□ -0.9
TARDBP-222ENST00000620505 KCNA1Q09470 495 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 PPP2R5DQ14738 602 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 VEPH1Q14D04 833 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 SDHAF4Q5VUM1 108 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 SCARA3Q6AZY7 606 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 FAM173BQ6P4H8 233 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 ITIH5Q86UX2 942 aa9.46□□□□□ -0.9
TARDBP-222ENST00000620505 EFCAB13Q8IY85 973 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms