RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CLIC2O15247 247 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 GMNNO75496 209 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 COILP38432 576 aaPredicted RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 NR1H3Q13133 447 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 PLEKHG4Q58EX7 1191 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 KIAA2013Q8IYS2 634 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 SRBD1Q8N5C6 995 aaKnown RBP12.88□□□□□ -0.35
MATR3-227ENST00000618441 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 PPP1R14CQ8TAE6 165 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 GJA10Q969M2 543 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 GREM2Q9H772 168 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 FADS3Q9Y5Q0 445 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
MATR3-227ENST00000618441 TPPPO94811 219 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 IFNB1P01574 187 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 APOEP02649 317 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 RAG1P15918 1043 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 OTUD4Q01804 1114 aaKnown RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 HIC1Q14526 733 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 PDCD4Q53EL6 469 aaKnown RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ANKMY2Q8IV38 441 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 COX4I2Q96KJ9 171 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 Q9H521 79 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 TIMMDC1Q9NPL8 285 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 SACM1LQ9NTJ5 587 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 POTEMA6NI47 508 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 GIPC1O14908 333 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 GTF2H1P32780 548 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ITGADQ13349 1161 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 GK3PQ14409 553 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 MAPK6Q16659 721 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 EGFLAMQ63HQ2 1017 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 CPNE8Q86YQ8 564 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 CAPSLQ8WWF8 208 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 HPS1Q92902 700 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 FHDC1Q9C0D6 1143 aaPredicted RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 SLC5A2P31639 672 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ITGA9Q13797 1035 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 NDUFAF2Q8N183 169 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 ERMNQ8TAM6 284 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 MKL1Q969V6 931 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
MATR3-227ENST00000618441 NUMBLQ9Y6R0 609 aa12.87□□□□□ -0.35
MATR3-227ENST00000618441 GNPATO15228 680 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 ADAM23O75077 832 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 SERPINB7O75635 380 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 STIP1P31948 543 aaKnown RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 ANKRD20A4Q4UJ75 823 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 PLEKHA7Q6IQ23 1121 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 XKR5Q6UX68 686 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 IPCEF1Q8WWN9 437 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 PLGRKTQ9HBL7 147 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 IQCA1LA6NCM1 817 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 ATP9BO43861 1147 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 SEC24DO94855 1032 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 OR52Z1P0C646 297 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 GOLGA8HP0CJ92 632 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 TGFB3P10600 412 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 CYP7A1P22680 504 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 HSPA1LP34931 641 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 MSX2P35548 267 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 C21orf59P57076 290 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 PRAMEP78395 509 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 RALGDSQ12967 914 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 MFSD5Q6N075 450 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 SCAIQ8N9R8 606 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 TUBB6Q9BUF5 446 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
MATR3-227ENST00000618441 TPK1Q9H3S4 243 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 GCNT4Q9P109 453 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 SLC7A8Q9UHI5 535 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
MATR3-227ENST00000618441 IGSF9BQ9UPX0 1349 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms