RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 RASA2Q15283 850 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 ZKSCAN8Q15776 578 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 CCL15Q16663 113 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 TAS1R3Q7RTX0 852 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 TRABD2AQ86V40 505 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 ECHDC2Q86YB7 292 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 SRRM1Q8IYB3 904 aaKnown RBP13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 REM2Q8IYK8 340 aaPredicted RBP13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 DENND1AQ8TEH3 1009 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 LPAR1Q92633 364 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 CFAP57Q96MR6 1250 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 PWWP2AQ96N64 755 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 R3HDMLQ9H3Y0 253 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 MRPL47Q9HD33 250 aaKnown RBP13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 MLXIPLQ9NP71 852 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 TCEAL9Q9UHQ7 104 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 AFG3L2Q9Y4W6 797 aa13.68□□□□□ -0.22
CLTCL1-210ENST00000617926 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 UNC5CO95185 931 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 C4BPAP04003 597 aaKnown RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 GTF2A2P52657 109 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 MAMLD1Q13495 774 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 LLGL2Q6P1M3 1020 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 MCPH1Q8NEM0 835 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 ELMO3Q96BJ8 720 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 TBC1D31Q96DN5 1066 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 RBM15Q96T37 977 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 SENP1Q9P0U3 644 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 GGT7Q9UJ14 662 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
CLTCL1-210ENST00000617926 RASA4BC9J798 803 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 NDC80O14777 642 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RASA4O43374 803 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 CA12O43570 354 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 LIASO43766 372 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 ZNF862O60290 1169 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■□ 22.2
CLTCL1-210ENST00000617926 ATP5HO75947 161 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 DSG3P32926 999 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 MSH2P43246 934 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 VPS41P49754 854 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 CCNG1P51959 295 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 YARSP54577 528 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 INHBEP58166 350 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RPS6P62753 249 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 MCL1Q07820 350 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 DGKZQ13574 1117 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 TMED2Q15363 201 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 PARP6Q2NL67 630 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 WDR44Q5JSH3 913 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 MIEF2Q96C03 454 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RBM41Q96IZ5 413 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RSRC1Q96IZ7 334 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 FAM213AQ9BRX8 229 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 HEMGNQ9BXL5 484 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 SMG5Q9UPR3 1016 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 DGAT1O75907 488 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 VNN1O95497 513 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 ANP32DO95626 131 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 PIK3CAP42336 1068 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 CUL2Q13617 745 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 P3H1Q32P28 736 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 LRRC38Q5VT99 294 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RCOR2Q8IZ40 523 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 ALLCQ8N6M5 410 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 NSMCE1Q8WV22 266 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 ATP6V0A1Q93050 837 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 RAB3IPQ96QF0 476 aaPredicted RBP13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 C11orf70Q9BRQ4 267 aa13.66□□□□□ -0.22
CLTCL1-210ENST00000617926 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms