RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SH2D4BQ5SQS7 431 aa10.66□□□□□ -0.7
SMARCA1-205ENST00000617310 IQSEC1Q6DN90 963 aa10.66□□□□□ -0.7
SMARCA1-205ENST00000617310 SLC25A41Q8N5S1 370 aa10.66□□□□□ -0.7
SMARCA1-205ENST00000617310 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
SMARCA1-205ENST00000617310 FAM47DPA6NHR8 397 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 E5RI56 91 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CALCAP01258 141 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 GARTP22102 1010 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 NFKBIAP25963 317 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 PNPLA4P41247 253 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 NAB2Q15742 525 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SZRD1Q7Z422 152 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ATPAF2Q8N5M1 289 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 GPATCH11Q8N954 259 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CFAP61Q8NHU2 1237 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 MAML1Q92585 1016 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 MED4Q9NPJ6 270 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 KRT82Q9NSB4 513 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 UVRAGQ9P2Y5 699 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CEP290O15078 2479 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SCNN1GP51170 649 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SESN3P58005 492 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 TAF1BQ53T94 588 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 OVOS1Q6IE37 1185 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 TATDN1Q6P1N9 297 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 SLC47A2Q86VL8 602 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CDKL3Q8IVW4 592 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CEP120Q8N960 986 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 LRRC1Q9BTT6 524 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 IKZF4Q9H2S9 585 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 CCDC195A0A1B0GUA6 201 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ANKRD63C9JTQ0 380 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 NKRFO15226 690 aaKnown RBP eCLIP10.65□□□□□ -0.76e-8■■■□□ 16.7
SMARCA1-205ENST00000617310 EIF4BP23588 611 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 KIF1AQ12756 1690 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 NCAPHQ15003 741 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ZSCAN26Q16670 478 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 THEMIS2Q5TEJ8 643 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 STKLD1Q8NE28 680 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 IPMKQ8NFU5 416 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ADAM32Q8TC27 787 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 WHAMMQ8TF30 809 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 ERGIC2Q96RQ1 377 aa10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
SMARCA1-205ENST00000617310 MRC1P22897 1456 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PPP1R12AO14974 1030 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 DNAJC6O75061 913 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PMPCBO75439 489 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 BAG2O95816 211 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 MYL4P12829 197 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 GPD1P21695 349 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 HARS2P49590 506 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PAPOLAP51003 745 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 IFT88Q13099 833 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ASAP3Q8TDY4 903 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 LPPQ93052 612 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CGRRF1Q99675 332 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 EGFL8Q99944 293 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CELF4Q9BZC1 486 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 IGFLR1Q9H665 355 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 SNX12Q9UMY4 172 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 COPEO14579 308 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CYP11B1P15538 503 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PAMP19021 973 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 NCF2P19878 526 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CHRNA3P32297 505 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 TMPRSS15P98073 1019 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 OCRLQ01968 901 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CELF3Q5SZQ8 465 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ITPRIPL1Q6GPH6 555 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 FRA10AC1Q70Z53 315 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 KAT5Q92993 513 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 DDX56Q9NY93 547 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ACKR2O00590 384 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 YWHAHQ04917 246 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 PDCLQ13371 301 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CDH18Q13634 790 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 LRRC14Q15048 493 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 TDRD10Q5VZ19 366 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 FEZF2Q8TBJ5 459 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 FGD4Q96M96 766 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 CACYBPQ9HB71 228 aaKnown RBP10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 FKTNO75072 461 aa10.64□□□□□ -0.71
SMARCA1-205ENST00000617310 MBL2P11226 248 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms