RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 PDCL2Q8N4E4 241 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 SLC4A11Q8NBS3 891 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 APPL2Q8NEU8 664 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 SLC30A5Q8TAD4 765 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 EIF3CQ99613 913 aaKnown RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 TMEM175Q9BSA9 504 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 ELOVL4Q9GZR5 314 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CXXC1Q9P0U4 656 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 REXO2Q9Y3B8 237 aaKnown RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 ADGRG1Q9Y653 693 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CHD9Q3L8U1 2897 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 DDX3XO00571 662 aaKnown RBP eCLIP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CYB561D2O14569 222 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 GABRDO14764 452 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 HUS1O60921 280 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CALCAP01258 141 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 PAEPP09466 180 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CYLC1P35663 651 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 NDST1P52848 882 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 FMO1Q01740 532 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 SLC18A3Q16572 532 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 PALB2Q86YC2 1186 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 LNX1Q8TBB1 728 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 HERVK_113Q902F9 699 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 SUSD3Q96L08 255 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
CBWD1-225ENST00000616944 ZSWIM1Q9BR11 485 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 CWH43Q9H720 699 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 SPTLC3Q9NUV7 552 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 MARCH5Q9NX47 278 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 ADAMTS1Q9UHI8 967 aa16.19■□□□□ 0.18
CBWD1-225ENST00000616944 NRP1O14786 923 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 AKR1B10O60218 316 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 CYP11A1P05108 521 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 WARSP23381 471 aaKnown RBP16.18■□□□□ 0.18
CBWD1-225ENST00000616944 GNA15P30679 374 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 BRCC3P46736 316 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 SLC11A1P49279 550 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 CDR2Q01850 454 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
CBWD1-225ENST00000616944 ZNF394Q53GI3 561 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 RASIP1Q5U651 963 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 UNC93AQ86WB7 457 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 GLYCTKQ8IVS8 523 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 CMTR2Q8IYT2 770 aaKnown RBP16.18■□□□□ 0.18
CBWD1-225ENST00000616944 ADGRF2Q8IZF7 708 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 ACRBPQ8NEB7 543 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 HASPINQ8TF76 798 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 DPF3Q92784 378 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 AGPAT1Q99943 283 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 DEF6Q9H4E7 631 aa16.18■□□□□ 0.18
CBWD1-225ENST00000616944 GJB5O95377 273 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 GALTP07902 379 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 MMEP08473 750 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 OR1G1P47890 313 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 HTRA4P83105 476 aaPredicted RBP16.17■□□□□ 0.18
CBWD1-225ENST00000616944 WSCD1Q658N2 575 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 OSTM1Q86WC4 334 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 SPATA18Q8TC71 538 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 TMEM176AQ96HP8 235 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 NT5C1AQ9BXI3 368 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 NAGPAQ9UK23 515 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 PRG3Q9Y2Y8 225 aaPredicted RBP16.17■□□□□ 0.18
CBWD1-225ENST00000616944 CHD7Q9P2D1 2997 aa16.17■□□□□ 0.18
CBWD1-225ENST00000616944 I3L4J1 428 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 HCRTO43612 131 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 EFEMP2O95967 443 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ODC1P11926 461 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ORC1Q13415 861 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 DSTYKQ6XUX3 929 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 VPS36Q86VN1 386 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ZNF606Q8WXB4 792 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 PCDHB18PQ96TA0 734 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ADAM28Q9UKQ2 775 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 PPP2R2CQ9Y2T4 447 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ZBBXA8MT70 800 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ALDH2P05091 517 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 TYMPP19971 482 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 BRD2P25440 801 aaKnown RBP16.16■□□□□ 0.18
CBWD1-225ENST00000616944 LMO2P25791 158 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 BCAR1P56945 870 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 TMEM173Q86WV6 379 aaPredicted RBP16.16■□□□□ 0.18
CBWD1-225ENST00000616944 CRYBG2Q8N1P7 616 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 OR6B3Q8NGW1 331 aa16.16■□□□□ 0.18
CBWD1-225ENST00000616944 LBHD1Q9BQE6 289 aaPredicted RBP16.16■□□□□ 0.18
CBWD1-225ENST00000616944 ATP8B3O60423 1300 aa16.15■□□□□ 0.18
CBWD1-225ENST00000616944 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms