RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MSH4O15457 936 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 DGKDQ16760 1214 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 METTL21CQ5VZV1 264 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.31e-6■■■□□ 15.3
TCF4-248ENST00000616053 CNBD2Q96M20 576 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 AMHP03971 560 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 PRELPP51888 382 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 HMGCS2P54868 508 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 STXBP1P61764 594 aaKnown RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 NNTQ13423 1086 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ULK3Q6PHR2 472 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 DTX3LQ8TDB6 740 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 HAUS4Q9H6D7 363 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 STRNO43815 780 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 KRT31Q15323 416 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 RASSF6Q6ZTQ3 369 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 FMO2Q99518 471 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ABI3Q9P2A4 366 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 F5H5T6 163 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 KRT6AP02538 564 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 KRT6BP04259 564 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 CMA1P23946 247 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 KRT6CP48668 564 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 PLD1Q13393 1074 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 TCEA2Q15560 299 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 CYGBQ8WWM9 190 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 ZMYND12Q9H0C1 365 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 RBAKQ9NYW8 714 aaPredicted RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 BLOC1S6Q9UL45 172 aa13.18□□□□□ -0.3
TCF4-248ENST00000616053 EPN1Q9Y6I3 576 aaPredicted RBP13.18□□□□□ -0.3
TCF4-248ENST00000616053 ENDOD1O94919 500 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 FAM20CQ8IXL6 584 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 PIPSLA2A3N6 862 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 RNFT2Q96EX2 444 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 NUP107P57740 925 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 SESN2P58004 480 aaPredicted RBP13.17□□□□□ -0.3
TCF4-248ENST00000616053 SNAP47Q5SQN1 464 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 CYP4Z2PQ8N1L4 340 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 SUN3Q8TAQ9 357 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 SERAC1Q96JX3 654 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 BRINP2Q9C0B6 783 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 CRYL1Q9Y2S2 319 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 SLC25A12O75746 678 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 EIF4A3P38919 411 aaKnown RBP13.17□□□□□ -0.3
TCF4-248ENST00000616053 XRCC4Q13426 336 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 RHBGQ9H310 441 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
TCF4-248ENST00000616053 CTIFO43310 598 aaKnown RBP13.17□□□□□ -0.3
TCF4-248ENST00000616053 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
TCF4-248ENST00000616053 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
TCF4-248ENST00000616053 RIC8BQ9NVN3 520 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 ZNF618Q5T7W0 954 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 TRIM17Q9Y577 477 aa13.17□□□□□ -0.3
TCF4-248ENST00000616053 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RASA4BC9J798 803 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RASA4O43374 803 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 ODC1P11926 461 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 C9orf131Q5VYM1 1079 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 H7C0S8 307 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 EEF2KO00418 725 aaKnown RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 TALDO1P37837 337 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 LRRC46Q96FV0 321 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.16□□□□□ -0.3
TCF4-248ENST00000616053 PCDHB11Q9Y5F2 797 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 FTCDO95954 541 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RARS2Q5T160 578 aaKnown RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 EPHX4Q8IUS5 362 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 P2RX5Q93086 422 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 DHTKD1Q96HY7 919 aaPredicted RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms