RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	RCCD1	A6NED2	376 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	TBKBP1	A7MCY6	615 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	TMCO5B	A8MYB1	307 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	CYB561D2	O14569	222 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	BRD2	P25440	801 aa	Known RBP	24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	DNAAF5	Q86Y56	855 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	ADGRF2	Q8IZF7	708 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	TOP6BL	Q8N6T0	577 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	SLC4A11	Q8NBS3	891 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	KBTBD7	Q8WVZ9	684 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	TMEM176A	Q96HP8	235 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	SENP8	Q96LD8	212 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	PCDHB18P	Q96TA0	734 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	IL23A	Q9NPF7	189 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	LUC7L	Q9NQ29	371 aa	Known RBP	24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	DNAJB4	Q9UDY4	337 aa		24.99	■■□□□ 1.59
CCND3-223	ENST00000616010	GOLGA6L9	A6NEM1	432 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	CD19	P15391	556 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	ARHGAP29	Q52LW3	1261 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	OR6B3	Q8NGW1	331 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	NT5C1A	Q9BXI3	368 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010		F8W810	466 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	TACC1	O75410	805 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	KIF4A	O95239	1232 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	PAEP	P09466	180 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	SSTR3	P32745	418 aa	Predicted RBP	24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	AARS	P49588	968 aa	Known RBP eCLIP	24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	DSTYK	Q6XUX3	929 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	LIMS2	Q7Z4I7	341 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	PDCL2	Q8N4E4	241 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	ZNF606	Q8WXB4	792 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	BAD	Q92934	168 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	C16orf45	Q96MC5	204 aa	Predicted RBP	24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	PACSIN1	Q9BY11	444 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	MRPL9	Q9BYD2	267 aa	Known RBP	24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	PDCL3	Q9H2J4	239 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	TAS2R14	Q9NYV8	317 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	HCST	Q9UBK5	93 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	NME7	Q9Y5B8	376 aa		24.98	■■□□□ 1.59
CCND3-223	ENST00000616010	AMH	P03971	560 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	ITGB1	P05556	798 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	OR1G1	P47890	313 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	DEFB103A	P81534	67 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	TIGD5	Q53EQ6	642 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	TFAP2B	Q92481	460 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	ZSWIM1	Q9BR11	485 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	LACRT	Q9GZZ8	138 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	TRIM10	Q9UDY6	481 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010	TSC2	P49815	1807 aa		24.97	■■□□□ 1.59
CCND3-223	ENST00000616010		I3L4J1	428 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	ABL1	P00519	1130 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	CFH	P08603	1231 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	ARHGAP25	P42331	645 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	WDR5	P61964	334 aa	Known RBP	24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	C10orf76	Q5T2E6	689 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	DCLRE1A	Q6PJP8	1040 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	DPH6	Q7L8W6	267 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	PASD1	Q8IV76	773 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	PRG3	Q9Y2Y8	225 aa	Predicted RBP	24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	HCRT	O43612	131 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	EFCAB14	O75071	495 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	BRCC3	P46736	316 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	FPGS	Q05932	587 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	PPIG	Q13427	754 aa	Known RBP eCLIP	24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	WSCD1	Q658N2	575 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	CD300LG	Q6UXG3	332 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	OTOP2	Q7RTS6	562 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	LRRC43	Q8N309	656 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	SNX25	Q9H3E2	840 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010	NRDE2	Q9H7Z3	1164 aa		24.96	■■□□□ 1.59
CCND3-223	ENST00000616010		A8MXQ7	604 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	BAIAP3	O94812	1187 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	KIF5A	Q12840	1032 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	TMCO2	Q7Z6W1	182 aa	Predicted RBP	24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	UNC93A	Q86WB7	457 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	RSPH1	Q8WYR4	309 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	HEXIM2	Q96MH2	286 aa	Known RBP	24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	COL4A6	Q14031	1691 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	SYN1	P17600	705 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	WARS	P23381	471 aa	Known RBP	24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	OSTM1	Q86WC4	334 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	TXLNB	Q8N3L3	684 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	TOP1MT	Q969P6	601 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	HTATIP2	Q9BUP3	242 aa		24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	TIMM13	Q9Y5L4	95 aa	Predicted RBP	24.95	■■□□□ 1.58
CCND3-223	ENST00000616010	DGKI	O75912	1065 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	ODC1	P11926	461 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	GNL1	P36915	607 aa	Predicted RBP	24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	CLEC16A	Q2KHT3	1053 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	FAM117B	Q6P1L5	589 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	C16orf59	Q7L2K0	433 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	ACOT1	Q86TX2	421 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	TSGA10	Q9BZW7	698 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	DPEP3	Q9H4B8	488 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	GUCA1B	Q9UMX6	200 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	STXBP5L	Q9Y2K9	1186 aa		24.94	■■□□□ 1.58
CCND3-223	ENST00000616010	KRT86	O43790	486 aa		24.93	■■□□□ 1.58
CCND3-223	ENST00000616010	PDGFRB	P09619	1106 aa		24.93	■■□□□ 1.58
CCND3-223	ENST00000616010	LMO2	P25791	158 aa		24.93	■■□□□ 1.58
CCND3-223	ENST00000616010	ZNF662	Q6ZS27	426 aa		24.93	■■□□□ 1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms