RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ADSLP30566 484 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-211ENST00000615798 TRADDQ15628 312 aa9.68□□□□□ -0.86
COL12A1-211ENST00000615798 OASLQ15646 514 aaKnown RBP9.68□□□□□ -0.86
COL12A1-211ENST00000615798 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
COL12A1-211ENST00000615798 PSTPIP2Q9H939 334 aa9.68□□□□□ -0.86
COL12A1-211ENST00000615798 XPO7Q9UIA9 1087 aaKnown RBP9.68□□□□□ -0.86
COL12A1-211ENST00000615798 ZFP69Q49AA0 526 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 FBXL16Q8N461 479 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 ACAT2Q9BWD1 397 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 EPB41L4AQ9HCS5 686 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 XDHP47989 1333 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 EXOC3O60645 756 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SARSP49591 514 aaKnown RBP9.67□□□□□ -0.86
COL12A1-211ENST00000615798 C12orf60Q5U649 245 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 RHPN2Q8IUC4 686 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 K7ERI5 159 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TXKP42681 527 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SVOPQ8N4V2 548 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TMEM168Q9H0V1 697 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SAYSD1Q9NPB0 183 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 NDUFA10O95299 355 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 RGS7P49802 495 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 NSL1Q96IY1 281 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 NLRC4Q9NPP4 1024 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 CBX3Q13185 183 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 CYB5D1Q6P9G0 228 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 PJA1Q8NG27 643 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TMCO1Q9UM00 188 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 ZCCHC18P0CG32 403 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SMCO1Q147U7 214 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 KCNJ14Q9UNX9 436 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 TBRG1Q3YBR2 411 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
COL12A1-211ENST00000615798 PRUNE1Q86TP1 453 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-211ENST00000615798 CNOT6LQ96LI5 555 aaKnown RBP9.67□□□□□ -0.86
COL12A1-211ENST00000615798 MED10Q9BTT4 135 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 VPS11Q9H270 941 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 FCGR1AP12314 374 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SCYL2Q6P3W7 929 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 DPP10Q8N608 796 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 SMARCAL1Q9NZC9 954 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 MAPRE3Q9UPY8 281 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 PPM1BO75688 479 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 KDSRQ06136 332 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF544Q6NX49 715 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 ASB12Q8WXK4 309 aa9.67□□□□□ -0.86
COL12A1-211ENST00000615798 KNL1Q8NG31 2342 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 IL12AP29459 219 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 RPS6KA3P51812 740 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 RANBP17Q9H2T7 1088 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 EDARQ9UNE0 448 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 KLRF2D3W0D1 207 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 PHGDHO43175 533 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 SLC7A5Q01650 507 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ARSHQ5FYA8 562 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 TOP3BO95985 862 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 A1BGP04217 495 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 MAPK4P31152 587 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 AP3B2Q13367 1082 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 C1orf94Q6P1W5 598 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 C3orf20Q8ND61 904 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 KCNIP3Q9Y2W7 256 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 PVALEFA0A1B0GWK0 134 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 FAM83BQ5T0W9 1011 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 SLC12A4Q9UP95 1085 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 LRCH1Q9Y2L9 728 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 AXIN2Q9Y2T1 843 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 MIF4GDA9UHW6 222 aaKnown RBP9.66□□□□□ -0.86
COL12A1-211ENST00000615798 SLC20A2Q08357 652 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ITGADQ13349 1161 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ITIH4Q14624 930 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 KCNB1Q14721 858 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 TAF2Q6P1X5 1199 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 DNAJC10Q8IXB1 793 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ARL8AQ96BM9 186 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 TBATAQ96M53 351 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 PNPLA8Q9NP80 782 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 EFCAB10A6NFE3 127 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 TNFAIP1Q13829 316 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 OR14I1A6ND48 311 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
COL12A1-211ENST00000615798 USP17L21D6R901 530 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms