RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 DEPTORQ8TB45 409 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 HASPINQ8TF76 798 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 RSAD2Q8WXG1 361 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 BICD1Q96G01 975 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
COL4A1-205ENST00000615732 DMAC2Q9NW81 257 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 CEP72Q9P209 647 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 TBX20Q9UMR3 447 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 CLUHO75153 1309 aa11.58□□□□□ -0.56
COL4A1-205ENST00000615732 FRYLO94915 3013 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 CCDC195A0A1B0GUA6 201 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 ASAP2O43150 1006 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 SCP2P22307 547 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
COL4A1-205ENST00000615732 ARL2P36404 184 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 STRN3Q13033 797 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 MTF1Q14872 753 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 MEA1Q16626 185 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 EXOC3L4Q17RC7 722 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 FUT10Q6P4F1 479 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PDXDC1Q6P996 788 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 C15orf39Q6ZRI6 1047 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 RRAGAQ7L523 313 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 GET4Q7L5D6 327 aaPredicted RBP11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PALB2Q86YC2 1186 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 MAP4K3Q8IVH8 894 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 RNF168Q8IYW5 571 aaPredicted RBP11.57□□□□□ -0.56
COL4A1-205ENST00000615732 DTWD2Q8NBA8 298 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 XXYLT1Q8NBI6 393 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 TMEM161BQ8NDZ6 487 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 BSNDQ8WZ55 320 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 SMG7Q92540 1137 aaKnown RBP11.57□□□□□ -0.56
COL4A1-205ENST00000615732 MYADMQ96S97 322 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PAAF1Q9BRP4 392 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 KIFC3Q9BVG8 833 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 GPR62Q9BZJ7 368 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 IKZF4Q9H2S9 585 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 DEF6Q9H4E7 631 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 UBN1Q9NPG3 1134 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PARP2Q9UGN5 583 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 FBXL21Q9UKT6 434 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 USP20Q9Y2K6 914 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 PAXBP1Q9Y5B6 917 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 ADGRG1Q9Y653 693 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 CACNA1AO00555 2505 aa11.57□□□□□ -0.56
COL4A1-205ENST00000615732 KRBA1A5PL33 1030 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 CASTOR2A6NHX0 329 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 EFEMP2O95967 443 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 CFHP08603 1231 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 AXLP30530 894 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 NAMPTP43490 491 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 ID4P47928 161 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 TERF1P54274 439 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 POLR2FP61218 127 aaKnown RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 CDK17Q00537 523 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 MYL7Q01449 175 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 DSG1Q02413 1049 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 BFSP1Q12934 665 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 HSP90AA2PQ14568 343 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 ARHGAP29Q52LW3 1261 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 SFMBT2Q5VUG0 894 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 KIAA0319Q5VV43 1072 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 SLC27A1Q6PCB7 646 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 PRSS55Q6UWB4 352 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 INTS8Q75QN2 995 aaKnown RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 REXO1L1PQ8IX06 675 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 CCDC170Q8IYT3 715 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 HACE1Q8IYU2 909 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 ACRBPQ8NEB7 543 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 CMASQ8NFW8 434 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 RIN2Q8WYP3 895 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 SLC35C1Q96A29 364 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 ZNF707Q96C28 371 aaPredicted RBP11.56□□□□□ -0.56
COL4A1-205ENST00000615732 RTP3Q9BQQ7 232 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 NLRC4Q9NPP4 1024 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 HSPBP1Q9NZL4 362 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 GCNT4Q9P109 453 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 STK39Q9UEW8 545 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 GIT1Q9Y2X7 761 aa11.56□□□□□ -0.56
COL4A1-205ENST00000615732 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
COL4A1-205ENST00000615732 LRRC53A6NM62 1247 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
COL4A1-205ENST00000615732 HNRNPDLO14979 420 aaKnown RBP11.55□□□□□ -0.56
COL4A1-205ENST00000615732 EPHB6O15197 1021 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 MAPK13O15264 365 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 TGM5O43548 720 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 NDUFA10O95299 355 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 LIG4P49917 911 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 KRT83P78385 493 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
COL4A1-205ENST00000615732 CETN1Q12798 172 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 GRIK3Q13003 919 aa11.55□□□□□ -0.56
COL4A1-205ENST00000615732 RAPGEF1Q13905 1077 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms