RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	SMIM24	O75264	130 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	MBL2	P11226	248 aa	Predicted RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	TUFM	P49411	452 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	COPS2	P61201	443 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	POLD3	Q15054	466 aa	Predicted RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	NTRK3	Q16288	839 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	CCDC149	Q6ZUS6	474 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	TMC7	Q7Z402	723 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	TRIM59	Q8IWR1	403 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SCFD1	Q8WVM8	642 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	DNAJB3	Q8WWF6	145 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285		Q9H521	79 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SUN2	Q9UH99	717 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	TXNDC9	O14530	226 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	CTIF	O43310	598 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	NCAM1	P13591	858 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ZNF135	P52742	658 aa	Predicted RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	YWHAH	Q04917	246 aa	Predicted RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	PDK2	Q15119	407 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	PKN1	Q16512	942 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SYTL3	Q4VX76	610 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	MEI1	Q5TIA1	1274 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	OTOP1	Q7RTM1	612 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	GAS2L3	Q86XJ1	694 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ULK4	Q96C45	1275 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	MCEE	Q96PE7	176 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	OSMR	Q99650	979 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SH2D3A	Q9BRG2	576 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	TRIM15	Q9C019	465 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ADGRG1	Q9Y653	693 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	CASZ1	Q86V15	1759 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	RAPGEF5	Q92565	580 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SH3KBP1	Q96B97	665 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	STN1	Q9H668	368 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	FAM49B	Q9NUQ9	324 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ZDHHC9	Q9Y397	364 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ANXA9	O76027	345 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	CYP3A7	P24462	503 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	PPM1A	P35813	382 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	MRPS6	P82932	125 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	BST2	Q10589	180 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	GPS1	Q13098	491 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	EIF2B5	Q13144	721 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ACAD10	Q6JQN1	1059 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	PRDM16	Q9HAZ2	1276 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	MRPL40	Q9NQ50	206 aa	Known RBP	10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	DOLK	Q9UPQ8	538 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	SLC45A1	Q9Y2W3	748 aa		10.05	□□□□□ -0.8
NCAM1-222	ENST00000615285	ROBO3	Q96MS0	1386 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	LRRC37A3	O60309	1634 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	TRIM66	O15016	1216 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	PSTPIP1	O43586	416 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	IRF1	P10914	325 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	IFNAR2	P48551	515 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CACNB2	Q08289	660 aa	Predicted RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	TRADD	Q15628	312 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	TMEM119	Q4V9L6	283 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	NOL9	Q5SY16	702 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	APBB2	Q92870	758 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	EFHD1	Q9BUP0	239 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	UBIAD1	Q9Y5Z9	338 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SLC30A1	Q9Y6M5	507 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285		H0Y626	953 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SEC31A	O94979	1220 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	LUC7L3	O95232	432 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	NR1I3	Q14994	352 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	DCAF6	Q58WW2	860 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CCDC137	Q6PK04	289 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	DEFB128	Q7Z7B8	93 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CRLF3	Q8IUI8	442 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	ABRA	Q8N0Z2	381 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CINP	Q9BW66	212 aa	Predicted RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CHST12	Q9NRB3	414 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SENP1	Q9P0U3	644 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	GTF3C4	Q9UKN8	822 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	DNAJC6	O75061	913 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	HSPA4L	O95757	839 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	MAP4	P27816	1152 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	AVPR1A	P37288	418 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	ADCYAP1R1	P41586	468 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	RARRES1	P49788	294 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SPARCL1	Q14515	664 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	GIPC2	Q8TF65	315 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	DCLK3	Q9C098	648 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SLC7A5P2	Q9GIP4	190 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	KLK14	Q9P0G3	267 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SERPINB9	P50453	376 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	PAN2	Q504Q3	1202 aa	Known RBP	10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	NAPEPLD	Q6IQ20	393 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	ANKS3	Q6ZW76	656 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	NECAB2	Q7Z6G3	386 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	SLC35G2	Q8TBE7	412 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	CPA5	Q8WXQ8	436 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	WDCP	Q9H6R7	721 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	MRGBP	Q9NV56	204 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	BAIAP2L1	Q9UHR4	511 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	RWDD3	Q9Y3V2	267 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	NRXN3	Q9Y4C0	1643 aa		10.04	□□□□□ -0.8
NCAM1-222	ENST00000615285	GSTA4	O15217	222 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms