RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 AGBL2Q5U5Z8 902 aa10.58□□□□□ -0.72
GGA3-221ENST00000614198 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
GGA3-221ENST00000614198 ZNF296Q8WUU4 475 aaPredicted RBP10.58□□□□□ -0.72
GGA3-221ENST00000614198 MKNK1Q9BUB5 465 aa10.58□□□□□ -0.72
GGA3-221ENST00000614198 TLR10Q9BXR5 811 aa10.58□□□□□ -0.72
GGA3-221ENST00000614198 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
GGA3-221ENST00000614198 CNTNAP2Q9UHC6 1331 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 F8VZ95 297 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 EXTL3O43909 919 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 PSEN2P49810 448 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 JAM2P57087 298 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 ALCAMQ13740 583 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 TRADDQ15628 312 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 FIGNQ5HY92 759 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 GLRA4Q5JXX5 417 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 SLC47A2Q86VL8 602 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 OLIG1Q8TAK6 271 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 AGAP11Q8TF27 550 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 SOCS4Q8WXH5 440 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 SELENOSQ9BQE4 189 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 YIPF3Q9GZM5 350 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 APEX2Q9UBZ4 518 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 CYP26A1O43174 497 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 SGPL1O95470 568 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 LINGO3P0C6S8 592 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 AKR1A1P14550 325 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 SLC26A2P50443 739 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 TFAMQ00059 246 aaKnown RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 KCNA10Q16322 511 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 ASTE1Q2TB18 679 aaPredicted RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 ZNF484Q5JVG2 852 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 SLC30A9Q6PML9 568 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 MFN1Q8IWA4 741 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 C12orf56Q8IXR9 622 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 DRAXINQ8NBI3 349 aaPredicted RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 CCDC197Q8NCU1 140 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 NOX5Q96PH1 765 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 MRPL4Q9BYD3 311 aaKnown RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 CDT1Q9H211 546 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 FZD8Q9H461 694 aa10.57□□□□□ -0.72
GGA3-221ENST00000614198 CNOT8Q9UFF9 292 aaKnown RBP10.57□□□□□ -0.72
GGA3-221ENST00000614198 GPR32O75388 356 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 RTN3O95197 1032 aaPredicted RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 ASGR1P07306 291 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 NEFHP12036 1026 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 AKAP5P24588 427 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 HSD17B3P37058 310 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 LLGL2Q6P1M3 1020 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 SCARA5Q6ZMJ2 495 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 ZBTB8OSQ8IWT0 167 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 FNBP1Q96RU3 617 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 PTPRHQ9HD43 1115 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 NOVA2Q9UNW9 492 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 SIP14410 1827 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 DIAPH2O60879 1101 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 TOM1L1O75674 476 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 LCA5LO95447 670 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 NFICP08651 508 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 AFF1P51825 1210 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 ASIC2Q16515 512 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 DDX42Q86XP3 938 aaKnown RBP eCLIP10.56□□□□□ -0.72
GGA3-221ENST00000614198 RNF39Q9H2S5 420 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 XPNPEP3Q9NQH7 507 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 RAB20Q9NX57 234 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 ACKR2O00590 384 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 TSPAN1O60635 241 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 FERP16591 822 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 GARTP22102 1010 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 CCND1P24385 295 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 HOXA11P31270 313 aaPredicted RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 HNRNPH3P31942 346 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 CWF19L1Q69YN2 538 aaKnown RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 KRT39Q6A163 491 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 TBC1D1Q86TI0 1168 aaPredicted RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 C7orf31Q8N865 590 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
GGA3-221ENST00000614198 CENPTQ96BT3 561 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 CHMP6Q96FZ7 201 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 ADAMTS10Q9H324 1103 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 STYXL1Q9Y6J8 313 aa10.56□□□□□ -0.72
GGA3-221ENST00000614198 ZNF236Q9UL36 1845 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 C4BPAP04003 597 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 RAP1GAPP47736 663 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 ITIH4Q14624 930 aa10.55□□□□□ -0.72
GGA3-221ENST00000614198 FAM133BQ5BKY9 247 aaKnown RBP10.55□□□□□ -0.72
GGA3-221ENST00000614198 ANKS4BQ8N8V4 417 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms