RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SOWAHAQ2M3V2 549 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 CBWD6Q4V339 395 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 CBWD3Q5JTY5 395 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 CBWD5Q5RIA9 395 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 LIN9Q5TKA1 542 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 IRF2BP1Q8IU81 584 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 AOPEPQ8N6M6 819 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 HDAC7Q8WUI4 952 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 FAXDC2Q96IV6 333 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 DNAI2Q9GZS0 605 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 NIF3L1Q9GZT8 377 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 PLEKHA4Q9H4M7 779 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 UBE2ZQ9H832 354 aaPredicted RBP14.21□□□□□ -0.13
MDC1-209ENST00000613547 SAMSN1Q9NSI8 373 aaKnown RBP14.21□□□□□ -0.13
MDC1-209ENST00000613547 DDX43Q9NXZ2 648 aaKnown RBP14.21□□□□□ -0.13
MDC1-209ENST00000613547 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 TRIP11Q15643 1979 aa14.21□□□□□ -0.13
MDC1-209ENST00000613547 BECN2A8MW95 431 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 LINC01565O15544 149 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TGM5O43548 720 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 EPCAMP16422 314 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 HOXB8P17481 243 aaPredicted RBP14.2□□□□□ -0.14
MDC1-209ENST00000613547 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
MDC1-209ENST00000613547 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
MDC1-209ENST00000613547 ELF1P32519 619 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TPM4P67936 248 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 CTC1Q2NKJ3 1217 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 HSP90AA4PQ58FG1 418 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TCP11X2Q5H9J9 407 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TPGS2Q68CL5 300 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 SCARA3Q6AZY7 606 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TMEM184AQ6ZMB5 413 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 DCP1BQ8IZD4 617 aaKnown RBP14.2□□□□□ -0.14
MDC1-209ENST00000613547 KREMEN2Q8NCW0 462 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 ZNF461Q8TAF7 563 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 ACBD6Q9BR61 282 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 TUBGCP2Q9BSJ2 902 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 PI4K2AQ9BTU6 479 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 FUCA2Q9BTY2 467 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 FANCLQ9NW38 375 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 MAFFQ9ULX9 164 aa14.2□□□□□ -0.14
MDC1-209ENST00000613547 PES1O00541 588 aaKnown RBP14.19□□□□□ -0.14
MDC1-209ENST00000613547 GABRDO14764 452 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 ADAM12O43184 909 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 KCNA5P22460 613 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 AAK1Q2M2I8 961 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 RSPO2Q6UXX9 243 aaPredicted RBP14.19□□□□□ -0.14
MDC1-209ENST00000613547 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 LIMS2Q7Z4I7 341 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 TTC39CQ8N584 583 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 OR6B3Q8NGW1 331 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 NT5C1BQ96P26 610 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 CYP3A43Q9HB55 503 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 MAN1C1Q9NR34 630 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 THEGQ9P2T0 379 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 BARX2Q9UMQ3 279 aaPredicted RBP14.19□□□□□ -0.14
MDC1-209ENST00000613547 POLIQ9UNA4 740 aa14.19□□□□□ -0.14
MDC1-209ENST00000613547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 A8MXQ7 604 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 PRRG1O14668 218 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 ABLIM3O94929 683 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 GLP2RO95838 553 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 SPATA31D3P0C874 917 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 ATF2P15336 505 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 GNL1P36915 607 aaPredicted RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 ASPAP45381 313 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 GPR17Q13304 367 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 KCNC3Q14003 757 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 NFE2Q16621 373 aaPredicted RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 VWA3BQ502W6 1294 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 SPOPLQ6IQ16 392 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 ANKRD54Q6NXT1 300 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 LILRA6Q6PI73 481 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 GBP6Q6ZN66 633 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 SPATA31D4Q6ZUB0 917 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 RTL10Q7L3V2 364 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 VN1R2Q8NFZ6 395 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 OR10T2Q8NGX3 314 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 KBTBD7Q8WVZ9 684 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 SEMA4DQ92854 862 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 TNIP3Q96KP6 325 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 MRPL45Q9BRJ2 306 aaKnown RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 ZCWPW1Q9H0M4 648 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 NDST4Q9H3R1 872 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 FAM124BQ9H5Z6 455 aaPredicted RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 SMYD3Q9H7B4 428 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 SFXN1Q9H9B4 322 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.146e-21■■■■■ 139.7
MDC1-209ENST00000613547 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 AFF4Q9UHB7 1163 aaKnown RBP14.18□□□□□ -0.14
MDC1-209ENST00000613547 FBXW11Q9UKB1 542 aa14.18□□□□□ -0.14
MDC1-209ENST00000613547 CDH9Q9ULB4 789 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms