RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CLCN3P51790 818 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 RPS6KA3P51812 740 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 LLGL1Q15334 1064 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 ACAD10Q6JQN1 1059 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 ENOSF1Q7L5Y1 443 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 PASD1Q8IV76 773 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 HOMER3Q9NSC5 361 aa17.47■□□□□ 0.39
CNOT3-208ENST00000613073 KIAA0391O15091 583 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 LGR5O75473 907 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 PRKCBP05771 671 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 DYDC1Q8WWB3 177 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 TSC22D3Q99576 134 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CGRRF1Q99675 332 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 MRPL4Q9BYD3 311 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CARD9Q9H257 536 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 FGFR1OP2Q9NVK5 253 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 ADAM22Q9P0K1 906 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 NUB1Q9Y5A7 615 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 PCDHB4Q9Y5E5 795 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 RGS16O15492 202 aaPredicted RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CSDE1O75534 798 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 NEFHP12036 1026 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 HADHBP55084 474 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 RNASELQ05823 741 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CUL2Q13617 745 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 MAPK6Q16659 721 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 LDLRAD1Q5T700 205 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 C11orf63Q6NUN7 778 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 ARMCX2Q7L311 632 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 NAF1Q96HR8 494 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 ERVK-5Q9HDB9 667 aa17.46■□□□□ 0.39
CNOT3-208ENST00000613073 UTP11Q9Y3A2 253 aaKnown RBP17.46■□□□□ 0.39
CNOT3-208ENST00000613073 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 INO80B-WBP1J3KQ70 363 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 B4GALT5O43286 388 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 SPOPO43791 374 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 TOM1L1O75674 476 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 MSH2P43246 934 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 NCOA4Q13772 614 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 TTLL4Q14679 1199 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 TMEM132AQ24JP5 1023 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 EFCAB12Q6NXP0 572 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ZBTB8OSQ8IWT0 167 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ACO2Q99798 780 aaKnown RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 TRIM7Q9C029 511 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 PAPOLBQ9NRJ5 636 aaKnown RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 GTF3C4Q9UKN8 822 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 CCDC188H7C350 402 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 CYP1A2P05177 515 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ALADP13716 330 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 EFNA5P52803 228 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 PLTPP55058 493 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 NOP14P78316 857 aaKnown RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ENPEPQ07075 957 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 MXD4Q14582 209 aaPredicted RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 HOOK3Q86VS8 718 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 THNSL1Q8IYQ7 743 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 UBL4BQ8N7F7 174 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ZSWIM1Q9BR11 485 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ZMYND8Q9ULU4 1186 aaPredicted RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 PCDHB2Q9Y5E7 798 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 EVPLQ92817 2033 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 PDHXO00330 501 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 PAPOLAP51003 745 aaKnown RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 MXRA7P84157 204 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 SLMAPQ14BN4 828 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ZPBP2Q6X784 338 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 GPRC5AQ8NFJ5 357 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 EPS8L3Q8TE67 593 aaKnown RBP17.45■□□□□ 0.38
CNOT3-208ENST00000613073 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
CNOT3-208ENST00000613073 ACO1P21399 889 aaKnown RBP17.44■□□□□ 0.38
CNOT3-208ENST00000613073 ADORA2AP29274 412 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 PCK1P35558 622 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 MMP13P45452 471 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 LACTBP83111 547 aaPredicted RBP17.44■□□□□ 0.38
CNOT3-208ENST00000613073 NKX1-2Q9UD57 310 aaPredicted RBP17.44■□□□□ 0.38
CNOT3-208ENST00000613073 A6NHS1 94 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 FAM189A1O60320 539 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 SNX3O60493 162 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 UNGP13051 313 aaPredicted RBP17.44■□□□□ 0.38
CNOT3-208ENST00000613073 ATP11AP98196 1134 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 SLC29A2Q14542 456 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 GPR162Q16538 588 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 DENND2CQ68D51 928 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 KCNN1Q92952 543 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 CENPTQ96BT3 561 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 MINDY3Q9H8M7 445 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 SNX24Q9Y343 169 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 SIP14410 1827 aa17.44■□□□□ 0.38
CNOT3-208ENST00000613073 IGKV6-21A0A0C4DH24 114 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 TCP11X1B4DZS4 312 aa17.43■□□□□ 0.38
CNOT3-208ENST00000613073 PYGMP11217 842 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms