RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TOP6BLQ8N6T0 577 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 RSPH1Q8WYR4 309 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 TWNKQ96RR1 684 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 SYT11Q9BT88 431 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 FAM124BQ9H5Z6 455 aaPredicted RBP18.71■□□□□ 0.59
SREK1-216ENST00000612404 DDX3XO00571 662 aaKnown RBP eCLIP18.71■□□□□ 0.595e-11■■□□□ 12.6
SREK1-216ENST00000612404 ITGB1P05556 798 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 CD19P15391 556 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 ANXA13P27216 316 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 RAD23BP54727 409 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 EPHB4P54760 987 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 KRT83P78385 493 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 CDR2Q01850 454 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 TIGD5Q53EQ6 642 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 PDCL2Q8N4E4 241 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 LNX1Q8TBB1 728 aaPredicted RBP18.71■□□□□ 0.59
SREK1-216ENST00000612404 WHAMMQ8TF30 809 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 KBTBD7Q8WVZ9 684 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 ELOVL4Q9GZR5 314 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 PDCL3Q9H2J4 239 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
SREK1-216ENST00000612404 FAM170AA1A519 330 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 ZNF263O14978 683 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 TACC1O75410 805 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 CHRNB2P17787 502 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 GNL1P36915 607 aaPredicted RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 BRCC3P46736 316 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 WSCD1Q658N2 575 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 CCAR2Q8N163 923 aaKnown RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 SLC4A11Q8NBS3 891 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 DDX1Q92499 740 aaKnown RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 TMEM176AQ96HP8 235 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 LBHD1Q9BQE6 289 aaPredicted RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 NT5C1AQ9BXI3 368 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 REXO2Q9Y3B8 237 aaKnown RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 TIMM13Q9Y5L4 95 aaPredicted RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 A8MXQ7 604 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 LCA5LO95447 670 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 ALDH2P05091 517 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 BRD2P25440 801 aaKnown RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 SSTR3P32745 418 aaPredicted RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 AARSP49588 968 aaKnown RBP eCLIP18.7■□□□□ 0.58
SREK1-216ENST00000612404 PSRC1Q6PGN9 363 aaPredicted RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 CD300LGQ6UXG3 332 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 DPH6Q7L8W6 267 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 ZNF677Q86XU0 584 aa18.7■□□□□ 0.58
SREK1-216ENST00000612404 HEXIM2Q96MH2 286 aaKnown RBP18.7■□□□□ 0.58
SREK1-216ENST00000612404 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.7■□□□□ 0.589e-7■□□□□ 9.9
SREK1-216ENST00000612404 TMCO5BA8MYB1 307 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 NRP1O14786 923 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 PAEPP09466 180 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 PDGFRBP09619 1106 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 ODC1P11926 461 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 FMO1Q01740 532 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 TMEM240Q5SV17 173 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 CCDC122Q5T0U0 273 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
SREK1-216ENST00000612404 LIMS2Q7Z4I7 341 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 SLC30A5Q8TAD4 765 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 OLIG1Q8TAK6 271 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 NAGPAQ9UK23 515 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 PCDHA13Q9Y5I0 950 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 CEP290O15078 2479 aa18.69■□□□□ 0.58
SREK1-216ENST00000612404 TADA2AO75478 443 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 PAX3P23760 479 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 SLC11A1P49279 550 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 SMYD5Q6GMV2 418 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 UNC93AQ86WB7 457 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 PALB2Q86YC2 1186 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 FAN1Q9Y2M0 1017 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 CCP110O43303 1012 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 HCRTO43612 131 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 WARSP23381 471 aaKnown RBP18.68■□□□□ 0.58
SREK1-216ENST00000612404 LMO2P25791 158 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 PBX3P40426 434 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 MAGEA1P43355 309 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
SREK1-216ENST00000612404 ACOT1Q86TX2 421 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 TFAP2BQ92481 460 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 PCDHB18PQ96TA0 734 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 YME1L1Q96TA2 773 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 LUC7LQ9NQ29 371 aaKnown RBP18.68■□□□□ 0.58
SREK1-216ENST00000612404 NME7Q9Y5B8 376 aa18.68■□□□□ 0.58
SREK1-216ENST00000612404 A0A0U1RQJ8 604 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 NT5C1B-RDH14C9J2C7 533 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 DNAAF5Q86Y56 855 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 PASD1Q8IV76 773 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 TMEM86AQ8N2M4 240 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ATRIPQ8WXE1 791 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ZNF689Q96CS4 500 aaPredicted RBP18.67■□□□□ 0.58
SREK1-216ENST00000612404 PPP1R13BQ96KQ4 1090 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 SUSD3Q96L08 255 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 TMEM175Q9BSA9 504 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 COLEC11Q9BWP8 271 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 CXXC1Q9P0U4 656 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms