RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 TDRD10Q5VZ19 366 aaKnown RBP27.96■■■□□ 2.07
VEGFA-226ENST00000611736 FAM186BQ8IYM0 893 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 ADSSL1Q8N142 457 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 EEF2KMTQ96G04 330 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 USTQ9Y2C2 406 aa27.96■■■□□ 2.07
VEGFA-226ENST00000611736 CLDN10P78369 228 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 CAMK4Q16566 473 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 SLC39A12Q504Y0 691 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 CENPPQ6IPU0 288 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 GET4Q7L5D6 327 aaPredicted RBP27.95■■■□□ 2.06
VEGFA-226ENST00000611736 OTOP3Q7RTS5 596 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 ADGRF2Q8IZF7 708 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 TOP6BLQ8N6T0 577 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 TMC2Q8TDI7 906 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 ACSF2Q96CM8 615 aaPredicted RBP27.95■■■□□ 2.06
VEGFA-226ENST00000611736 TSG101Q99816 390 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 C1QTNF1Q9BXJ1 281 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 ZCWPW1Q9H0M4 648 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 HCFC1R1Q9NWW0 138 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 MAFFQ9ULX9 164 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 DOCK8Q8NF50 2099 aa27.95■■■□□ 2.06
VEGFA-226ENST00000611736 MTMR11A4FU01 709 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 MAPK13O15264 365 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 POU2F2P09086 479 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 PSMC2P35998 433 aaKnown RBP27.94■■■□□ 2.06
VEGFA-226ENST00000611736 VAMP7P51809 220 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 AP3M2P53677 418 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 MYL6P60660 151 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 DUSP4Q13115 394 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 STIM1Q13586 685 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 CLEC17AQ6ZS10 378 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 TMEM86AQ8N2M4 240 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 ATAD1Q8NBU5 361 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 EPHX3Q9H6B9 360 aa27.94■■■□□ 2.06
VEGFA-226ENST00000611736 CLSTN1O94985 981 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 C4BPAP04003 597 aaKnown RBP27.93■■■□□ 2.06
VEGFA-226ENST00000611736 KRT13P13646 458 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 GBP2P32456 591 aaPredicted RBP27.93■■■□□ 2.06
VEGFA-226ENST00000611736 PMS1P54277 932 aaKnown RBP27.93■■■□□ 2.06
VEGFA-226ENST00000611736 TWF1Q12792 350 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 SOWAHAQ2M3V2 549 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 ANKRD40Q6AI12 368 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 OSTM1Q86WC4 334 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 MMS19Q96T76 1030 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 CRISPLD1Q9H336 500 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 DDX43Q9NXZ2 648 aaKnown RBP27.93■■■□□ 2.06
VEGFA-226ENST00000611736 SLC27A5Q9Y2P5 690 aa27.93■■■□□ 2.06
VEGFA-226ENST00000611736 NOTCH4Q99466 2003 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 TRIM49BA6NDI0 452 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 PSMA7O14818 248 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 CETN3O15182 167 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 DCXO43602 365 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 N4BP1O75113 896 aaKnown RBP27.92■■■□□ 2.06
VEGFA-226ENST00000611736 TRIM49P0CI25 452 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 TRIM49CP0CI26 452 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 CD44P16070 742 aaKnown RBP27.92■■■□□ 2.06
VEGFA-226ENST00000611736 BMP6P22004 513 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 FSHRP23945 695 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 ACAT1P24752 427 aaKnown RBP27.92■■■□□ 2.06
VEGFA-226ENST00000611736 TSPY1Q01534 308 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 NCOA4Q13772 614 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 MORC3Q14149 939 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 C1orf220Q5T0J3 134 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 KLHL10Q6JEL2 608 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 INTS8Q75QN2 995 aaKnown RBP27.92■■■□□ 2.06
VEGFA-226ENST00000611736 LRRTM3Q86VH5 581 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 TTC9BQ8N6N2 239 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 MYADMQ96S97 322 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 DNMT3BQ9UBC3 853 aaKnown RBP27.92■■■□□ 2.06
VEGFA-226ENST00000611736 LIMD1Q9UGP4 676 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 YIPF1Q9Y548 306 aa27.92■■■□□ 2.06
VEGFA-226ENST00000611736 PI4K2BG5E9Z4 385 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 HCRTO43612 131 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 TNNC1P63316 161 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 MYL7Q01449 175 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 PABPC1LQ4VXU2 614 aaKnown RBP27.91■■■□□ 2.06
VEGFA-226ENST00000611736 DCP1BQ8IZD4 617 aaKnown RBP27.91■■■□□ 2.06
VEGFA-226ENST00000611736 ZDHHC14Q8IZN3 488 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 PLCD3Q8N3E9 789 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 SYAP1Q96A49 352 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-226ENST00000611736 GBP4Q96PP9 640 aa27.91■■■□□ 2.06
VEGFA-226ENST00000611736 EPB41P11171 864 aaKnown RBP27.9■■■□□ 2.06
VEGFA-226ENST00000611736 ALADP13716 330 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 CCNE1P24864 410 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 LHX1P48742 406 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 WDR72Q3MJ13 1102 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 SV2AQ7L0J3 742 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 DPH6Q7L8W6 267 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 ELMOD1Q8N336 334 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 SPATA18Q8TC71 538 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 KBTBD7Q8WVZ9 684 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 ELMO3Q96BJ8 720 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 DHTKD1Q96HY7 919 aaPredicted RBP27.9■■■□□ 2.06
VEGFA-226ENST00000611736 XYLT2Q9H1B5 865 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 MMRN2Q9H8L6 949 aa27.9■■■□□ 2.06
VEGFA-226ENST00000611736 NXF1Q9UBU9 619 aaKnown RBP27.9■■■□□ 2.06
VEGFA-226ENST00000611736 IKBKBO14920 756 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 SOAT2O75908 522 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 VNN1O95497 513 aa27.89■■■□□ 2.06
VEGFA-226ENST00000611736 ASGR2P07307 311 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms