RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MTMR6Q9Y217 621 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 FRMD3A2A2Y4 597 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 KPNA7A9QM74 516 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 ARNTLO00327 626 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 ZNF263O14978 683 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 IL18RAPO95256 599 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 GCNT3O95395 438 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 IDEP14735 1019 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 TUFMP49411 452 aaKnown RBP8.23□□□□□ -1.09
CUX1-219ENST00000606749 TAF6P49848 677 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 CASP5P51878 434 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 WNT7BP56706 349 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 CSTF1Q05048 431 aaKnown RBP8.23□□□□□ -1.09
CUX1-219ENST00000606749 MGAT5BQ3V5L5 792 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 SLC39A12Q504Y0 691 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 STXBP5Q5T5C0 1151 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 SCARA3Q6AZY7 606 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 MAMSTRQ6ZN01 415 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 ITIH5Q86UX2 942 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 NT5DC4Q86YG4 428 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 ARID3BQ8IVW6 561 aaPredicted RBP8.23□□□□□ -1.09
CUX1-219ENST00000606749 EFCAB13Q8IY85 973 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 THEM5Q8N1Q8 247 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 SUMF1Q8NBK3 374 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 FAM3CQ92520 227 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 RSPRY1Q96DX4 576 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 LRRC3BQ96PB8 259 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 FAM213AQ9BRX8 229 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 MKNK1Q9BUB5 465 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 FGFBP2Q9BYJ0 223 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 BACH2Q9BYV9 841 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 ATXN3LQ9H3M9 355 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 SLITRK6Q9H5Y7 841 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 OLFML3Q9NRN5 406 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 FOXD4L1Q9NU39 408 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 PANK4Q9NVE7 773 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 NDRG2Q9UN36 371 aaKnown RBP8.23□□□□□ -1.09
CUX1-219ENST00000606749 NCANO14594 1321 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 DMDP11532 3685 aa8.23□□□□□ -1.09
CUX1-219ENST00000606749 SCN1AP35498 2009 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GOLGA8IPA6NC78 632 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GOLGA8JA6NMD2 632 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 CHADO15335 359 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 STX6O43752 255 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 KINO60870 393 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 PRPF6O94906 941 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 FGF19O95750 216 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 LDHAP00338 332 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 HAPLN1P10915 354 aaPredicted RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 ATF6P18850 670 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GARTP22102 1010 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 CCNE1P24864 410 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GABRR2P28476 465 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 WEE1P30291 646 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 STAT6P42226 847 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 NASPP49321 788 aaPredicted RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 MLLT6P55198 1093 aaPredicted RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 TFAMQ00059 246 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 FCHO2Q0JRZ9 810 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 SMARCB1Q12824 385 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 MTAPQ13126 283 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 ALCAMQ13740 583 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 SV2CQ496J9 727 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GPR158Q5T848 1215 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 SYCP3Q8IZU3 236 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 CSGALNACT2Q8N6G5 542 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 PDILTQ8N807 584 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 LINC00301Q8NCQ3 95 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 FAM200AQ8TCP9 573 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 GIPC2Q8TF65 315 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 C2orf15Q8WU43 125 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 CACTINQ8WUQ7 758 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 ATRIPQ8WXE1 791 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 NELL1Q92832 810 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 SAAL1Q96ER3 474 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 SEPT5Q99719 369 aaPredicted RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 LMAN1LQ9HAT1 526 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 IL21Q9HBE4 155 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 ZSCAN32Q9NX65 697 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
CUX1-219ENST00000606749 PIAS3Q9Y6X2 628 aa8.22□□□□□ -1.09
CUX1-219ENST00000606749 FRYLO94915 3013 aa8.21□□□□□ -1.09
CUX1-219ENST00000606749 ANK1P16157 1881 aa8.21□□□□□ -1.09
CUX1-219ENST00000606749 MIA3Q5JRA6 1907 aa8.21□□□□□ -1.09
CUX1-219ENST00000606749 RIF1Q5UIP0 2472 aaKnown RBP8.21□□□□□ -1.09
CUX1-219ENST00000606749 K7ELQ4 463 aaPredicted RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 DPYSL4O14531 572 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 SPTLC2O15270 562 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 EXTL3O43909 919 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 LILRB5O75023 590 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 ITGB3P05106 788 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 CHRNB1P11230 501 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 POLR2BP30876 1174 aaKnown RBP8.21□□□□□ -1.1
CUX1-219ENST00000606749 PNPLA4P41247 253 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 ID4P47928 161 aa8.21□□□□□ -1.1
CUX1-219ENST00000606749 VEPH1Q14D04 833 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms